RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 UCMAQ8WVF2 138 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 PIWIL1Q96J94 861 aaKnown RBP12.42□□□□□ -0.42
HERC1-202ENST00000558324 CD248Q9HCU0 757 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 AJAP1Q9UKB5 411 aaPredicted RBP12.42□□□□□ -0.42
HERC1-202ENST00000558324 NAALADL1Q9UQQ1 740 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 RALGAPA1Q6GYQ0 2036 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 LNP1A1A4G5 178 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 E5RJQ4 531 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 GFRA2O00451 464 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 CAPN9O14815 690 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 KHNYNO15037 678 aaKnown RBP12.41□□□□□ -0.42
HERC1-202ENST00000558324 MOCS2O96007 188 aaPredicted RBP12.41□□□□□ -0.42
HERC1-202ENST00000558324 FYNP06241 537 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 PNMA6AP0CW24 399 aaPredicted RBP12.41□□□□□ -0.42
HERC1-202ENST00000558324 PON1P27169 355 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 SLC11A2P49281 568 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 LIMK1P53667 647 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 ZNF234Q14588 700 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 MAN2A1Q16706 1144 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 FUT11Q495W5 492 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 LYSMD4Q5XG99 296 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 DQX1Q8TE96 717 aaKnown RBP12.41□□□□□ -0.42
HERC1-202ENST00000558324 TMA16Q96EY4 203 aaKnown RBP12.41□□□□□ -0.42
HERC1-202ENST00000558324 MRGPRX1Q96LB2 322 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 SLC2A11Q9BYW1 496 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 ELOVL2Q9NXB9 296 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 TJP2Q9UDY2 1190 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 SDK1Q7Z5N4 2213 aa12.41□□□□□ -0.42
HERC1-202ENST00000558324 IGHV1OR15-9A0A0B4J2B8 117 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 C4orf47A7E2U8 309 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 PES1O00541 588 aaKnown RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 PAPSS1O43252 624 aaPredicted RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 SART1O43290 800 aaKnown RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 AP5Z1O43299 807 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 SYNCRIPO60506 623 aaKnown RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 TBL1XO60907 577 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 LATS1O95835 1130 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 IGLV3-27P01718 113 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 ITPKAP23677 461 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 PRKCHP24723 683 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 HLA-FP30511 346 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 SLC6A4P31645 630 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 ACADSBP45954 432 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 ZNF445P59923 1031 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 IRX4P78413 519 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 PDCLQ13371 301 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 EIF4HQ15056 248 aaKnown RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 FAM133BQ5BKY9 247 aaKnown RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 TRIM61Q5EBN2 209 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 SYPL2Q5VXT5 272 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 TMEM215Q68D42 235 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 SERPINA13PQ6UXR4 307 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 CHST9Q7L1S5 443 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 FAM114A1Q8IWE2 563 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 UNC45BQ8IWX7 931 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 CYB5D2Q8WUJ1 264 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 FCRL2Q96LA5 508 aaPredicted RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 SERPINB11Q96P15 392 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 THAP9Q9H5L6 903 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 TMEM74BQ9NUR3 256 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 ABCB8Q9NUT2 735 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 STIM2Q9P246 746 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 THAP10Q9P2Z0 257 aaPredicted RBP12.4□□□□□ -0.42
HERC1-202ENST00000558324 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 STOML2Q9UJZ1 356 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
HERC1-202ENST00000558324 CACNA1AO00555 2505 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 FAM170AA1A519 330 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 ACSL4O60488 711 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 ZNF217O75362 1048 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 CFIP05156 583 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 EPHX1P07099 455 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 HLA-EP13747 358 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 MAPK8P45983 427 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 RPL34P49207 117 aaKnown RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 RING1Q06587 406 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 VWA3BQ502W6 1294 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 FNDC3BQ53EP0 1204 aaKnown RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 PIK3R6Q5UE93 754 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 NADSYN1Q6IA69 706 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 SLC36A4Q6YBV0 504 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 STK32AQ8WU08 396 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 SHC3Q92529 594 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 MYEOVQ96EZ4 313 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms