RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ST7Q9NRC1 585 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 STOML2Q9UJZ1 356 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 INVSQ9Y283 1065 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 SLC27A6Q9Y2P4 619 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 NFE2L3Q9Y4A8 694 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 A0A1W2PQF6 199 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 E5RJQ4 531 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 LATS1O95835 1130 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 PNMA6AP0CW24 399 aaPredicted RBP9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 NCAM1P13591 858 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 NTSR1P30989 418 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 WASP42768 502 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 PDCLQ13371 301 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 GEN1Q17RS7 908 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 USP39Q53GS9 565 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 ADGRF1Q5T601 910 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 KLHDC7AQ5VTJ3 777 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 CDKAL1Q5VV42 579 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 BEND5Q7L4P6 421 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 TRMT11Q7Z4G4 463 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 FAM71AQ8IYT1 594 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 DQX1Q8TE96 717 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 DDI1Q8WTU0 396 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 PIWIL1Q96J94 861 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 GABRG3Q99928 467 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 LHX5Q9H2C1 402 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 SEMA4GQ9NTN9 838 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 DLL3Q9NYJ7 618 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 TJP2Q9UDY2 1190 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 USP18Q9UMW8 372 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 PCDHGC3Q9UN70 934 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 NAALADL1Q9UQQ1 740 aa9.15□□□□□ -0.94
SNRPA1-206ENST00000558059 NCOR2Q9Y618 2525 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 NUMA1Q14980 2115 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 WASH3PC4AMC7 463 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 SART1O43290 800 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TSPAN3O60637 253 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 ALDH1A2O94788 518 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 EPN2O95208 641 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 CYBBP04839 570 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 HOXB2P14652 356 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 BCKDHBP21953 392 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 HOXD9P28356 352 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 SGSHP51688 502 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TBX4P57082 545 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 PTK2Q05397 1052 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 RING1Q06587 406 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 NNTQ13423 1086 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 DRAP1Q14919 205 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TAF5Q15542 800 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 CSRP2Q16527 193 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 MAP7D1Q3KQU3 841 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 MPPE1Q53F39 396 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 FAM133BQ5BKY9 247 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 SYPL2Q5VXT5 272 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TMEM215Q68D42 235 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 RNF43Q68DV7 783 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 C11orf57Q6ZUT1 292 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 SLC47A2Q86VL8 602 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 PASD1Q8IV76 773 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 UNC45BQ8IWX7 931 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 CHPFQ8IZ52 775 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 IPO4Q8TEX9 1081 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 HMGB4Q8WW32 186 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 RLN3Q8WXF3 142 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 GOLGA1Q92805 767 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 AZIN2Q96A70 460 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 FAM149B1Q96BN6 582 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TMA16Q96EY4 203 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 SLC39A13Q96H72 371 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 FCRL2Q96LA5 508 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 CPXM1Q96SM3 734 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 NAA15Q9BXJ9 866 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 SLC2A11Q9BYW1 496 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 ARRDC1-AS1Q9H2J1 176 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 THAP10Q9P2Z0 257 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 ASCC3Q8N3C0 2202 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 TNRC6BQ9UPQ9 1833 aaKnown RBP9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 CACNA1EQ15878 2313 aa9.14□□□□□ -0.95
SNRPA1-206ENST00000558059 PCNX2A6NKB5 2137 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 GOLGA6L7A0A1B0GV03 622 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 TCRBV21S2A2A0A5A6 115 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 PRR5-ARHGAP8B1AHC4 643 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ACSL4O60488 711 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 RHOBTB1O94844 696 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 IGLV3-25P01717 112 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 ZNF806P0C7X5 589 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 GABRG2P18507 467 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 SLC6A4P31645 630 aa9.13□□□□□ -0.95
SNRPA1-206ENST00000558059 P2RY2P41231 377 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms