RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ADH5P11766 374 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 GPD1P21695 349 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 PTPN9P43378 593 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 VCPP55072 806 aaKnown RBP26.54■■□□□ 1.84
SMAD6-202ENST00000557916 ATP11AP98196 1134 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 GAD2Q05329 585 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 ANO4Q32M45 955 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 ADGRF1Q5T601 910 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 C1orf228Q6PIY5 440 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 FAM217AQ8IXS0 508 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 FAM3CQ92520 227 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 PBXIP1Q96AQ6 731 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 CHFRQ96EP1 664 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 SPTLC3Q9NUV7 552 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 TMEM51Q9NW97 253 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 SLC12A6Q9UHW9 1150 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 SCINQ9Y6U3 715 aa26.54■■□□□ 1.84
SMAD6-202ENST00000557916 CXCR3P49682 368 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 GALCP54803 685 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 PPP2R5DQ14738 602 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 C15orf59Q2T9L4 293 aaPredicted RBP26.53■■□□□ 1.84
SMAD6-202ENST00000557916 TXNDC11Q6PKC3 985 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 BNIPLQ7Z465 357 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 CPXM2Q8N436 756 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 ATP6V0D2Q8N8Y2 350 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 FLCNQ8NFG4 579 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 BTN2A3PQ96KV6 586 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 C1QTNF1Q9BXJ1 281 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 THAP2Q9H0W7 228 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 MRPL47Q9HD33 250 aaKnown RBP26.53■■□□□ 1.84
SMAD6-202ENST00000557916 C11orf16Q9NQ32 467 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 COL4A3Q01955 1670 aa26.53■■□□□ 1.84
SMAD6-202ENST00000557916 KANSL1LA0AUZ9 987 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 KCNU1A8MYU2 1149 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 GOLGA6L6A8MZA4 724 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 ENDOD1O94919 500 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 ZNF143P52747 638 aaPredicted RBP26.52■■□□□ 1.84
SMAD6-202ENST00000557916 CDO1Q16878 200 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 BMP8AQ7Z5Y6 402 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 BBS2Q9BXC9 721 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 WDCPQ9H6R7 721 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 MARK1Q9P0L2 795 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 MRPS17Q9Y2R5 130 aaKnown RBP26.52■■□□□ 1.84
SMAD6-202ENST00000557916 PAXBP1Q9Y5B6 917 aa26.52■■□□□ 1.84
SMAD6-202ENST00000557916 GOLGA6L7A0A1B0GV03 622 aa26.51■■□□□ 1.83
SMAD6-202ENST00000557916 TRDMT1O14717 391 aaKnown RBP26.51■■□□□ 1.83
SMAD6-202ENST00000557916 HOXC11O43248 304 aaPredicted RBP26.51■■□□□ 1.83
SMAD6-202ENST00000557916 GPR37L1O60883 481 aa26.51■■□□□ 1.83
SMAD6-202ENST00000557916 RDXP35241 583 aaKnown RBP26.51■■□□□ 1.83
SMAD6-202ENST00000557916 ATXN1P54253 815 aaKnown RBP26.51■■□□□ 1.83
SMAD6-202ENST00000557916 GAB4Q2WGN9 574 aa26.51■■□□□ 1.83
SMAD6-202ENST00000557916 SH3PXD2AQ5TCZ1 1133 aa26.51■■□□□ 1.83
SMAD6-202ENST00000557916 NADSYN1Q6IA69 706 aa26.51■■□□□ 1.83
SMAD6-202ENST00000557916 DDX50Q9BQ39 737 aaKnown RBP26.51■■□□□ 1.83
SMAD6-202ENST00000557916 FOXQ1Q9C009 403 aa26.51■■□□□ 1.83
SMAD6-202ENST00000557916 XPO7Q9UIA9 1087 aaKnown RBP26.51■■□□□ 1.83
SMAD6-202ENST00000557916 TMEM191CA6NGB0 347 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 NEDD8-MDP1E9PL57 170 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 TSPAN3O60637 253 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 UBXN2BQ14CS0 331 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 PON2Q15165 354 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 FAM133BQ5BKY9 247 aaKnown RBP26.5■■□□□ 1.83
SMAD6-202ENST00000557916 BRMS1LQ5PSV4 323 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 FAM172AQ8WUF8 416 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 CENPIQ92674 756 aaPredicted RBP26.5■■□□□ 1.83
SMAD6-202ENST00000557916 BHMTQ93088 406 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 NELL2Q99435 816 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 LTB4R2Q9NPC1 389 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 NDRG2Q9UN36 371 aaKnown RBP26.5■■□□□ 1.83
SMAD6-202ENST00000557916 F5P12259 2224 aa26.5■■□□□ 1.83
SMAD6-202ENST00000557916 CYBBP04839 570 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 CYP1A2P05177 515 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 H2AFZP0C0S5 128 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 TYRP14679 529 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 FECHP22830 423 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 SLC6A4P31645 630 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 GALK1P51570 392 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 MTA1Q13330 715 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 RAB6CQ53S08 254 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 NAIF1Q69YI7 327 aaPredicted RBP26.49■■□□□ 1.83
SMAD6-202ENST00000557916 H2AFVQ71UI9 128 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 STRADAQ7RTN6 431 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 TMTC1Q8IUR5 882 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 CCDC170Q8IYT3 715 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 NAT16Q8N8M0 369 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 EXOC4Q96A65 974 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 P2RY13Q9BPV8 354 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 CNPY3Q9BT09 278 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 PACSIN1Q9BY11 444 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 TKTL2Q9H0I9 626 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 RAB6CQ9H0N0 254 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 ARHGEF38Q9NXL2 777 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 PLK2Q9NYY3 685 aa26.49■■□□□ 1.83
SMAD6-202ENST00000557916 FAM170BA6NMN3 283 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 GFRA2O00451 464 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 CCP110O43303 1012 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 DESP17661 470 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 OPRD1P41143 372 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 OGDHQ02218 1023 aa26.48■■□□□ 1.83
SMAD6-202ENST00000557916 MPPE1Q53F39 396 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms