RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PIGVQ9NUD9 493 aa14.9□□□□□ -0.02
USP3-205ENST00000557884 RRN3Q9NYV6 651 aa14.9□□□□□ -0.02
USP3-205ENST00000557884 PLK2Q9NYY3 685 aa14.9□□□□□ -0.02
USP3-205ENST00000557884 MYO1AQ9UBC5 1043 aa14.9□□□□□ -0.02
USP3-205ENST00000557884 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
USP3-205ENST00000557884 MRPS17Q9Y2R5 130 aaKnown RBP14.9□□□□□ -0.02
USP3-205ENST00000557884 TCRBV5S1A1TA0A578 114 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 C2CD4BA6NLJ0 364 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 SIGLEC16A6NMB1 481 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 HOXC11O43248 304 aaPredicted RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 AKR1B10O60218 316 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 TYRP14679 529 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 ABCB4P21439 1286 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 SDC4P31431 198 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 CCR1P32246 355 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 CHKAP35790 457 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 OPRD1P41143 372 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 GALK1P51570 392 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 DEUP1Q05D60 604 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 KDSRQ06136 332 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 EIF4EBP2Q13542 120 aaPredicted RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 CCDC14Q49A88 953 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 RAB6CQ53S08 254 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 FAM133BQ5BKY9 247 aaKnown RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 ADGRF1Q5T601 910 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 SH3PXD2AQ5TCZ1 1133 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 NADSYN1Q6IA69 706 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 ALKBH5Q6P6C2 394 aaKnown RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 RFWD3Q6PCD5 774 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 DCUN1D2Q6PH85 259 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 TMEM105Q8N8V8 129 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 CD101Q93033 1021 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 NT5C3BQ969T7 300 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 VCPIP1Q96JH7 1222 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 P2RY13Q9BPV8 354 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 RAB6CQ9H0N0 254 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 ISCUQ9H1K1 167 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 NHEJ1Q9H9Q4 299 aaPredicted RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 RBM12Q9NTZ6 932 aaKnown RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 SIT1Q9Y3P8 196 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 HELZP42694 1942 aaKnown RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 COL4A2P08572 1712 aa14.89□□□□□ -0.03
USP3-205ENST00000557884 KIF26AQ9ULI4 1882 aaPredicted RBP14.89□□□□□ -0.03
USP3-205ENST00000557884 TICRRQ7Z2Z1 1910 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SSU72P8A0A1W2PR75 194 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 LATS1O95835 1130 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 EGFP01133 1207 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 AOC1P19801 751 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 GPD1P21695 349 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SLC6A4P31645 630 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SGSHP51688 502 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 CLCN5P51795 746 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 MESP2Q0VG99 397 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 MAMLD1Q13495 774 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 PPP1R15BQ5SWA1 713 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 RAP1GAP2Q684P5 730 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 PLEKHA7Q6IQ23 1121 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 FSTL4Q6MZW2 842 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 C1orf228Q6PIY5 440 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SND1Q7KZF4 910 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP3-205ENST00000557884 ARCQ7LC44 396 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 CHSY1Q86X52 802 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 FAM217AQ8IXS0 508 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 CCDC105Q8IYK2 499 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 ZNF687Q8N1G0 1237 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 CPXM2Q8N436 756 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 DDI1Q8WTU0 396 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 MYEOVQ96EZ4 313 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 TRIM11Q96F44 468 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 CCDC42Q96M95 316 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 LMAN1LQ9HAT1 526 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SPTLC3Q9NUV7 552 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 PARVAQ9NVD7 372 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP3-205ENST00000557884 MARK1Q9P0L2 795 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 SLC12A6Q9UHW9 1150 aa14.88□□□□□ -0.03
USP3-205ENST00000557884 ANKRD62A6NC57 917 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 TRIM24O15164 1050 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 CYBBP04839 570 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 MYBL1P10243 752 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 SLC2A3P11169 496 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 CDC25BP30305 580 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 RDXP35241 583 aaKnown RBP14.87□□□□□ -0.03
USP3-205ENST00000557884 GGCXP38435 758 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 CXCR3P49682 368 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 OGDHQ02218 1023 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 GRSF1Q12849 480 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP3-205ENST00000557884 PPP2R5DQ14738 602 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 SLC18A3Q16572 532 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 ASTE1Q2TB18 679 aaPredicted RBP14.87□□□□□ -0.03
USP3-205ENST00000557884 TMEM196Q5HYL7 178 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 FYB2Q5VWT5 728 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 FAM131BQ86XD5 332 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 SFTPA1Q8IWL2 248 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 ATP6V0D2Q8N8Y2 350 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 FAM172AQ8WUF8 416 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 AZIN2Q96A70 460 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 ARHGEF26Q96DR7 871 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms