RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MAP1BP46821 2468 aaKnown RBP15.28■□□□□ 0.04
SHMT2-235ENST00000557740 BIN1O00499 593 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 TSPAN3O60637 253 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 LATS1O95835 1130 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 CEACAM1P13688 526 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 CD6P30203 668 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 IL12RB1P42701 662 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 DAOAP59103 153 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 ZNF234Q14588 700 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 SYCP2LQ5T4T6 812 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 FOXR2Q6PJQ5 311 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 SERPINA13PQ6UXR4 307 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 SLC41A1Q8IVJ1 513 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 HDDC3Q8N4P3 179 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 IRGQQ8WZA9 623 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 FOXJ1Q92949 421 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 KAT5Q92993 513 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 SLC32A1Q9H598 525 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 CD93Q9NPY3 652 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 SUSD2Q9UGT4 822 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 CLEC4EQ9ULY5 219 aa15.27■□□□□ 0.04
SHMT2-235ENST00000557740 MEI4A8MW99 385 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 PPP1R3GB7ZBB8 358 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 PIK3R2O00459 728 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 TIMM44O43615 452 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 FBXO21O94952 628 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 GNA14O95837 355 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 EPHX1P07099 455 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 HOXD9P28356 352 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-235ENST00000557740 GCNT1Q02742 428 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 PAK1Q13153 545 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 ENPP2Q13822 863 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 MORC3Q14149 939 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 CNGA2Q16280 664 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 WDR45BQ5MNZ6 344 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 ADGRF1Q5T601 910 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 MSANTD2Q6P1R3 559 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 RRAGAQ7L523 313 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 RGL4Q8IZJ4 473 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 DEFB124Q8NES8 71 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 WFIKKN2Q8TEU8 576 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 SLC35F5Q8WV83 523 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 SORCS1Q8WY21 1168 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 TMA16Q96EY4 203 aaKnown RBP15.26■□□□□ 0.03
SHMT2-235ENST00000557740 MKRN2Q9H000 416 aaKnown RBP15.26■□□□□ 0.03
SHMT2-235ENST00000557740 CAPN10Q9HC96 672 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 FSCN3Q9NQT6 498 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 STOML2Q9UJZ1 356 aa15.26■□□□□ 0.03
SHMT2-235ENST00000557740 AFPP02771 609 aaKnown RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 LTFP02788 710 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 ACADMP11310 421 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 GNSP15586 552 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 BMP6P22004 513 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 PRKCHP24723 683 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 STX17P56962 302 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 FOXC1Q12948 553 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 FNDC3BQ53EP0 1204 aaKnown RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 METTL3Q86U44 580 aaKnown RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 ARHGEF19Q8IW93 802 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 LMO3Q8TAP4 145 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 PRCCQ92733 491 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 SIPA1Q96FS4 1042 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 TOE1Q96GM8 510 aaKnown RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 ZSWIM1Q9BR11 485 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 INTS2Q9H0H0 1204 aaKnown RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 ABCB8Q9NUT2 735 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 USP36Q9P275 1121 aaKnown RBP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHMT2-235ENST00000557740 LAMA1P25391 3075 aa15.25■□□□□ 0.03
SHMT2-235ENST00000557740 RNF225M0QZC1 329 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-235ENST00000557740 ARHGAP33O14559 1287 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 OPHN1O60890 802 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 CALCAP01258 141 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 SYPP08247 313 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 NCAM1P13591 858 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 KRT5P13647 590 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 HLA-FP30511 346 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 SLC11A2P49281 568 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 KCNH2Q12809 1159 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 PLEKHG6Q3KR16 790 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 CHST9Q7L1S5 443 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 TMPRSS6Q8IU80 811 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 TRIM59Q8IWR1 403 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 AHI1Q8N157 1196 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 MINDY1Q8N5J2 469 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 CLEC4CQ8WTT0 213 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 ZNF419Q96HQ0 510 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-235ENST00000557740 GPR174Q9BXC1 333 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 MIS12Q9H081 205 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 ST7Q9NRC1 585 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 WSB2Q9NYS7 404 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-235ENST00000557740 GGA2Q9UJY4 613 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 PLA2G4CQ9UP65 541 aa15.24■□□□□ 0.03
SHMT2-235ENST00000557740 TNRC6BQ9UPQ9 1833 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms