RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TNFRSF25Q93038 417 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 ARRDC3Q96B67 414 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 POM121Q96HA1 1249 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 NTPCRQ9BSD7 190 aaKnown RBP9.93□□□□□ -0.82
NEDD1-211ENST00000557454 AGXT2Q9BYV1 514 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 NACA2Q9H009 215 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEDD1-211ENST00000557454 TMEM30AQ9NV96 361 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 UCKL1Q9NWZ5 548 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 ELOVL2Q9NXB9 296 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 SERGEFQ9UGK8 458 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 KIAA1024Q9UPX6 916 aa9.93□□□□□ -0.82
NEDD1-211ENST00000557454 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 LY6G6EA0A0G2JKS1 128 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 GABRDO14764 452 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 DTNBO60941 627 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 YWHAQP27348 245 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 CDC25AP30304 524 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 SLC5A2P31639 672 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 LHX1P48742 406 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 ACOT2P49753 483 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 GALCP54803 685 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 POLE2P56282 527 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 ZBTB16Q05516 673 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 RAD51AP2Q09MP3 1159 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 SLC45A4Q5BKX6 768 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 MANEAQ5SRI9 462 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 HAUS3Q68CZ6 603 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 SCARA3Q6AZY7 606 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 SMYD5Q6GMV2 418 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 ZSCAN1Q8NBB4 408 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 PDZD8Q8NEN9 1154 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 IFI44Q8TCB0 444 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 GANCQ8TET4 914 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 GRAMD1AQ96CP6 724 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 PCED1BQ96HM7 432 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 C8orf48Q96LL4 319 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 APOLD1Q96LR9 279 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 JAKMIP1Q96N16 626 aaKnown RBP9.92□□□□□ -0.82
NEDD1-211ENST00000557454 ASB7Q9H672 318 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 C17orf75Q9HAS0 396 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 ZNF71Q9NQZ8 489 aaPredicted RBP9.92□□□□□ -0.82
NEDD1-211ENST00000557454 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 DDX19AQ9NUU7 478 aaKnown RBP9.92□□□□□ -0.82
NEDD1-211ENST00000557454 CHORDC1Q9UHD1 332 aaPredicted RBP9.92□□□□□ -0.82
NEDD1-211ENST00000557454 U3KQA8 63 aa9.92□□□□□ -0.82
NEDD1-211ENST00000557454 KIF26BQ2KJY2 2108 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 A0A0B4J269 797 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 WIPF3A6NGB9 483 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 E9PMD0 336 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 SEMA7AO75326 666 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 KRT7P08729 469 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 PLS3P13797 630 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 MUTP22033 750 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 DGKAP23743 735 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 LMO2P25791 158 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 TUBP50607 506 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 SMTNP53814 917 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 FNDC3BQ53EP0 1204 aaKnown RBP9.91□□□□□ -0.82
NEDD1-211ENST00000557454 TMEM215Q68D42 235 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 RINT1Q6NUQ1 792 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 BLOC1S2Q6QNY1 142 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 RBM44Q6ZP01 1051 aaKnown RBP9.91□□□□□ -0.82
NEDD1-211ENST00000557454 MAMDC2Q7Z304 686 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-211ENST00000557454 JAMLQ86YT9 394 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 FBXL16Q8N461 479 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 MOCOSQ96EN8 888 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 PIWIL1Q96J94 861 aaKnown RBP9.91□□□□□ -0.82
NEDD1-211ENST00000557454 CAAP1Q9H8G2 361 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 LSM7Q9UK45 103 aaKnown RBP9.91□□□□□ -0.82
NEDD1-211ENST00000557454 AGAP1Q9UPQ3 857 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 SNX9Q9Y5X1 595 aa9.91□□□□□ -0.82
NEDD1-211ENST00000557454 COL27A1Q8IZC6 1860 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-211ENST00000557454 CLDN1O95832 211 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 PENKP01210 267 aaPredicted RBP9.9□□□□□ -0.82
NEDD1-211ENST00000557454 ITGB3P05106 788 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 GIMD1P0DJR0 217 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 LIPCP11150 499 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 XBP1P17861 261 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 PLCG1P19174 1290 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 GNLYP22749 145 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 MCM7P33993 719 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 KRT2P35908 639 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 PDX1P52945 283 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 MLLT10P55197 1068 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 EVCP57679 992 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 ARID5AQ03989 594 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 EIF4HQ15056 248 aaKnown RBP9.9□□□□□ -0.82
NEDD1-211ENST00000557454 SOWAHAQ2M3V2 549 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 MDH1BQ5I0G3 518 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 FYB2Q5VWT5 728 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 ZNF776Q68DI1 518 aaPredicted RBP9.9□□□□□ -0.82
NEDD1-211ENST00000557454 CAPRIN2Q6IMN6 1127 aaKnown RBP9.9□□□□□ -0.82
NEDD1-211ENST00000557454 SLC39A4Q6P5W5 647 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 BORAQ6PGQ7 559 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 CRTC1Q6UUV9 634 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 C1orf186Q6ZWK4 172 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 TOP6BLQ8N6T0 577 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 OR2T34Q8NGX1 318 aa9.9□□□□□ -0.82
NEDD1-211ENST00000557454 SCAMP5Q8TAC9 235 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms