RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 MARCH2Q9P0N8 246 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 CEP192Q8TEP8 1941 aa12.89□□□□□ -0.35
SNX6-209ENST00000557265 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 SLC12A8A0AV02 714 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 IKBKBO14920 756 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 NR3C1P04150 777 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 STK4Q13043 487 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 CAMK2GQ13555 558 aaPredicted RBP12.88□□□□□ -0.35
SNX6-209ENST00000557265 PTPRNQ16849 979 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 PPP1R26Q5T8A7 1209 aaPredicted RBP12.88□□□□□ -0.35
SNX6-209ENST00000557265 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 RSRC2Q7L4I2 434 aaKnown RBP12.88□□□□□ -0.35
SNX6-209ENST00000557265 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 CPXM2Q8N436 756 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 IGSF8Q969P0 613 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 ZNF396Q96N95 335 aaPredicted RBP12.88□□□□□ -0.35
SNX6-209ENST00000557265 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
SNX6-209ENST00000557265 OSGEPQ9NPF4 335 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 STRIP2Q9ULQ0 834 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 PLA2G4CQ9UP65 541 aa12.88□□□□□ -0.35
SNX6-209ENST00000557265 H0Y8X5 98 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 PCDHGA12O60330 932 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 FSBPO95073 299 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 YEATS4O95619 227 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 SEMA4FO95754 770 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 CD27P26842 260 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 GRIA4P48058 902 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 CCT8P50990 548 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 IL9RQ01113 521 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
SNX6-209ENST00000557265 KCNT1Q5JUK3 1230 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 FAM217AQ8IXS0 508 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 ARHGAP18Q8N392 663 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 ENGASEQ8NFI3 743 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 TAS1R2Q8TE23 839 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 CYB5D2Q8WUJ1 264 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 BIRC7Q96CA5 298 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
SNX6-209ENST00000557265 HEXIM2Q96MH2 286 aaKnown RBP12.87□□□□□ -0.35
SNX6-209ENST00000557265 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 ARID3AQ99856 593 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 BTBD1Q9H0C5 482 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 FRMD4BQ9Y2L6 1034 aa12.87□□□□□ -0.35
SNX6-209ENST00000557265 PDXKO00764 312 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 KLRC4O43908 158 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 TSPAN3O60637 253 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 HOXD9P28356 352 aaPredicted RBP12.86□□□□□ -0.35
SNX6-209ENST00000557265 HLA-FP30511 346 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 GCLMP48507 274 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 VAMP7P51809 220 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 YWHAGP61981 247 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNX6-209ENST00000557265 MPPE1Q53F39 396 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 ZNF394Q53GI3 561 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
SNX6-209ENST00000557265 ADAM32Q8TC27 787 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 PLD4Q96BZ4 506 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 NIF3L1Q9GZT8 377 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 FTSJ1Q9UET6 329 aa12.86□□□□□ -0.35
SNX6-209ENST00000557265 GOLGA4Q13439 2230 aaKnown RBP12.86□□□□□ -0.35
SNX6-209ENST00000557265 CABIN1Q9Y6J0 2220 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PLK4O00444 970 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 DNTTP04053 509 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PRB1P04280 392 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 C7P10643 843 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 CTSKP43235 329 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 ABCG1P45844 678 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 HARS2P49590 506 aaKnown RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 BCAT1P54687 386 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 RPS14P62263 151 aaKnown RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 ZBTB16Q05516 673 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 TRIP4Q15650 581 aaPredicted RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 RAB41Q5JT25 222 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 ADIPOR2Q86V24 386 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PIGZQ86VD9 579 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 TMPRSS12Q86WS5 348 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 CEP57L1Q8IYX8 460 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 WFIKKN2Q8TEU8 576 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms