RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 OR1D2P34982 312 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ARHGAP25P42331 645 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 GPD2P43304 727 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 GRIA4P48058 902 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 LHX1P48742 406 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 NOMO3P69849 1222 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PTP4A2Q12974 167 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PSMD5Q16401 504 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SLC18A3Q16572 532 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PTPN20Q4JDL3 420 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CTXN3Q4LDR2 81 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SGO2Q562F6 1265 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CYP4A22Q5TCH4 519 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PLPP4Q5VZY2 271 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ARHGAP17Q68EM7 881 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 FAM171BQ6P995 826 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 MMS22LQ6ZRQ5 1243 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SPATA31D4Q6ZUB0 917 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 VN1R5Q7Z5H4 357 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ADGRD2Q7Z7M1 963 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 DDX53Q86TM3 631 aaKnown RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CPNE8Q86YQ8 564 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 REXO1L1PQ8IX06 675 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 VPS52Q8N1B4 723 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 THEM5Q8N1Q8 247 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CCDC112Q8NEF3 446 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ZMIZ2Q8NF64 920 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 KIAA1524Q8TCG1 905 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CLEC4CQ8WTT0 213 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 POF1BQ8WVV4 589 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 TRIM44Q96DX7 344 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM169Q96HH4 297 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PCED1BQ96HM7 432 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 FAXDC2Q96IV6 333 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 FRMD6Q96NE9 622 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 KCNK16Q96T55 309 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 EIF3CQ99613 913 aaKnown RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CDCA3Q99618 268 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SMOQ99835 787 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CLSTN3Q9BQT9 956 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ACBD6Q9BR61 282 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 C11orf70Q9BRQ4 267 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 TTPALQ9BTX7 342 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ZCWPW1Q9H0M4 648 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ZBP1Q9H171 429 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CHST7Q9NS84 486 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 MYO1AQ9UBC5 1043 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CDH9Q9ULB4 789 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ZKSCAN5Q9Y2L8 839 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PPP2R2CQ9Y2T4 447 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PCDHB12Q9Y5F1 795 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 PCDHA13Q9Y5I0 950 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CDY1Q9Y6F8 540 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 DUSP10Q9Y6W6 482 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 TECTAO75443 2155 aa5.59□□□□□ -1.52
ATXN3-244ENST00000556898 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 MTMR11A4FU01 709 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 METTL12A8MUP2 240 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 HIDE1A8MVS5 230 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 GIPC1O14908 333 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 SART1O43290 800 aaKnown RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 TRAPPC3O43617 180 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 BUB1O43683 1085 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 LCA5LO95447 670 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 SEC24AO95486 1093 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 FTLP02792 175 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ERBB2P04626 1255 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 FAM163BP0C2L3 166 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 LCP1P13796 627 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 HOXB8P17481 243 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 RRM1P23921 792 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 CYLC1P35663 651 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 GLUD2P49448 558 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 CLCN5P51795 746 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 GALCP54803 685 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 MAP3K7CLP57077 242 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 BPIFB4P59827 614 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ROR1Q01973 937 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 DSG1Q02413 1049 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 UBE3AQ05086 875 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 FZD5Q13467 585 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 BMS1Q14692 1282 aaKnown RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 PTPN14Q15678 1187 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 CNGA2Q16280 664 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 DDR2Q16832 855 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 USP41Q3LFD5 358 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ANKRD34AQ69YU3 496 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ACAD10Q6JQN1 1059 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ZNF280DQ6N043 979 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 KIAA1841Q6NSI8 718 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 PMF1Q6P1K2 205 aa5.58□□□□□ -1.52
ATXN3-244ENST00000556898 ALKBH5Q6P6C2 394 aaKnown RBP5.58□□□□□ -1.52
ATXN3-244ENST00000556898 LCLAT1Q6UWP7 414 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms