RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 METTL18O95568 372 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 APRTP07741 180 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 VAV1P15498 845 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 GPX6P59796 221 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 AP1B1Q10567 949 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 KCNJ11Q14654 390 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 CTXN3Q4LDR2 81 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 HEATR6Q6AI08 1181 aaKnown RBP18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 MFSD5Q6N075 450 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 PDIK1LQ8N165 341 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 TTC9BQ8N6N2 239 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 CCNYQ8ND76 341 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 BCAS4Q8TDM0 211 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 DQX1Q8TE96 717 aaKnown RBP18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 TFB1MQ8WVM0 346 aaKnown RBP18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 RTP4Q96DX8 246 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 TTC25Q96NG3 672 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 QKIQ96PU8 341 aaKnown RBP eCLIP18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 CCDC77Q9BR77 488 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 HIPK3Q9H422 1215 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 SEPT10Q9P0V9 454 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 SFMBT1Q9UHJ3 866 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 CHMP2BQ9UQN3 213 aa18.93■□□□□ 0.62
SDR39U1-220ENST00000556548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TBKBP1A7MCY6 615 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TMEM189-UBE2V1I3L0A0 370 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 SOAT2O75908 522 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 UPP2O95045 317 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 CYP2C18P33260 490 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 SLC11A1P49279 550 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 YWHAGP61981 247 aaKnown RBP eCLIP18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 STAT4Q14765 748 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 IGDCC3Q8IVU1 814 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 ATAD1Q8NBU5 361 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 IRGQQ8WZA9 623 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 ARHGEF2Q92974 986 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 CLUHO75153 1309 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 PITPNM1O00562 1244 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TNFRSF10BO14763 440 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 DGKIO75912 1065 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 ALDH2P05091 517 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 ERCC2P18074 760 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TPI1P60174 286 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 DPYSQ14117 519 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 ARL13BQ3SXY8 428 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TNFAIP8L3Q5GJ75 292 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 FAM107BQ9H098 131 aa18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 RCOR3Q9P2K3 495 aaPredicted RBP18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 ZNF638Q14966 1978 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-220ENST00000556548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 MSI1O43347 362 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 CHN1P15882 459 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 XRCC4Q13426 336 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 EFTUD2Q15029 972 aaKnown RBP eCLIP18.91■□□□□ 0.621e-24■□□□□ 11
SDR39U1-220ENST00000556548 TMED2Q15363 201 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 BTBD8Q5XKL5 378 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 C3orf62Q6ZUJ4 267 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 PALM2Q8IXS6 379 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 DCP1BQ8IZD4 617 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 PGAP3Q96FM1 320 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 OLFM3Q96PB7 478 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 SLC9A7Q96T83 725 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 KLC2Q9H0B6 622 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 SIK2Q9H0K1 926 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 STMN4Q9H169 189 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 ELAC1Q9H777 363 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 NMUR1Q9HB89 426 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 MARCH5Q9NX47 278 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 OGDHLQ9ULD0 1010 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 RRP15Q9Y3B9 282 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 IVLP07476 585 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 ABHD2P08910 425 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 GCAP28676 217 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 ELK3P41970 407 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 MMP13P45452 471 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 CXCR3P49682 368 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 DENND5BQ6ZUT9 1274 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 HTR3CQ8WXA8 447 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 NTAN1Q96AB6 310 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 PNPLA8Q9NP80 782 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 OR12D3Q9UGF7 316 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 SLC27A5Q9Y2P5 690 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 TTC3P53804 2025 aa18.91■□□□□ 0.62
SDR39U1-220ENST00000556548 A0A1W2PQH9 124 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 F9P00740 461 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 SRGAP2BP0DMP2 458 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 COL6A1P12109 1028 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 ARHGEF18Q6ZSZ5 1173 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 TAS1R1Q7RTX1 841 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 SCD5Q86SK9 330 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 PRDM12Q9H4Q4 367 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 SCN5AQ14524 2016 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 NLRC5Q86WI3 1866 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 E7EVH7 732 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 DCLK1O15075 740 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 CHADO15335 359 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 TCEA3O75764 348 aa18.9■□□□□ 0.62
SDR39U1-220ENST00000556548 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms