RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.4□□□□□ -1.38
TDP1-215ENST00000556498 MRPL41Q8IXM3 137 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 TBC1D19Q8N5T2 526 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 CPSF7Q8N684 471 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 ZNF461Q8TAF7 563 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 METTL6Q8TCB7 284 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 PHOSPHO2Q8TCD6 241 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 ADAMTS16Q8TE57 1224 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 FBLIM1Q8WUP2 373 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 SLC44A1Q8WWI5 657 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 KCTD13Q8WZ19 329 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 CCT6BQ92526 530 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 MRPS27Q92552 414 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 DACT3Q96B18 629 aaPredicted RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 DGCR14Q96DF8 476 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 MYRFLQ96LU7 910 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 RANBP9Q96S59 729 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 MMS19Q96T76 1030 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 PIP5K1AQ99755 562 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 BCL7BQ9BQE9 202 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 PINK1Q9BXM7 581 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 GON7Q9BXV9 100 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 LHX5Q9H2C1 402 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 NDST4Q9H3R1 872 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 DPEP3Q9H4B8 488 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 MARCH7Q9H992 704 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 ZNF408Q9H9D4 720 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 LIN28AQ9H9Z2 209 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 FBRSQ9HAH7 460 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 SYTL2Q9HCH5 934 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 CD209Q9NNX6 404 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 INTS7Q9NVH2 962 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 TJP2Q9UDY2 1190 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 EIF2B4Q9UI10 523 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 DNAJC12Q9UKB3 198 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 VPS4AQ9UN37 437 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 RUVBL1Q9Y265 456 aaKnown RBP6.4□□□□□ -1.38
TDP1-215ENST00000556498 DTNAQ9Y4J8 743 aa6.4□□□□□ -1.38
TDP1-215ENST00000556498 TCOF1Q13428 1488 aaKnown RBP6.4□□□□□ -1.39
TDP1-215ENST00000556498 MEIS3P2A8K0S8 358 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ZNF879B4DU55 563 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 DDX39AO00148 427 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 PSMD11O00231 422 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SHOXO15266 292 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PPIP5K2O43314 1243 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 BUB1O43683 1085 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PI15O43692 258 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 BRINP1O60477 761 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PDE8AO60658 829 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 DNAJA2O60884 412 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 GOSR1O95249 250 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 HSPA4LO95757 839 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SYF2O95926 243 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 CYP2A6P11509 494 aaPredicted RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 BMP3P12645 472 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 CCNE1P24864 410 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 NMT1P30419 496 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 GUCY1A2P33402 732 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 EIF2B2P49770 351 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 GTF2A2P52657 109 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 AP1S2P56377 157 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 CARD18P57730 90 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 RHAGQ02094 409 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PPARAQ07869 468 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 AIMP1Q12904 312 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 CALCOCO2Q13137 446 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PLD1Q13393 1074 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 RAPSNQ13702 412 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SLBPQ14493 270 aaKnown RBP eCLIP6.39□□□□□ -1.39
TDP1-215ENST00000556498 NPTX1Q15818 432 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 NKG7Q16617 165 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ALG11Q2TAA5 492 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 LSM12Q3MHD2 195 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 TBRG1Q3YBR2 411 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 MMEL1Q495T6 779 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SLC39A12Q504Y0 691 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 LIN52Q52LA3 116 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ZC2HC1CQ53FD0 456 aaPredicted RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 MDH1BQ5I0G3 518 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 C6orf10Q5SRN2 563 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 FAM102BQ5T8I3 360 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SLX4IPQ5VYV7 408 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 OLFML2BQ68BL8 750 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 SLC6A19Q695T7 634 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 FAM109BQ6ICB4 259 aaPredicted RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 LRRC8BQ6P9F7 803 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 UTS2BQ765I0 119 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 PEX26Q7Z412 305 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 UBE3DQ7Z6J8 389 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 CDH24Q86UP0 819 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 NME9Q86XW9 330 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 DCP2Q8IU60 420 aaKnown RBP6.39□□□□□ -1.39
TDP1-215ENST00000556498 CCDC36Q8IYA8 594 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ZBTB44Q8NCP5 570 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 CLHC1Q8NHS4 586 aa6.39□□□□□ -1.39
TDP1-215ENST00000556498 ZNF473Q8WTR7 871 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms