RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CHKAP35790 457 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 HARS2P49590 506 aaKnown RBP8.44□□□□□ -1.06
VTI1B-206ENST00000556461 DGKEP52429 567 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SPEM2Q0P670 501 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SYCP1Q15431 976 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CCDC6Q16204 474 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 ANO6Q4KMQ2 910 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 C2CD6Q53TS8 623 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 ZC3H12AQ5D1E8 599 aaKnown RBP8.44□□□□□ -1.06
VTI1B-206ENST00000556461 ADGRF1Q5T601 910 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 LAIR1Q6GTX8 287 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 OLFML1Q6UWY5 402 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CEP68Q76N32 757 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 DEFB106AQ8N104 65 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CCDC26Q8TAB7 109 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SLC20A1Q8WUM9 679 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 RLN3Q8WXF3 142 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SORCS1Q8WY21 1168 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 GOLGA1Q92805 767 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 PRICKLE1Q96MT3 831 aaPredicted RBP8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SLC2A13Q96QE2 648 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 FUCA2Q9BTY2 467 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 STK33Q9BYT3 514 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 NUCKS1Q9H1E3 243 aaKnown RBP8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SLC6A17Q9H1V8 727 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 FAM207AQ9NSI2 230 aaPredicted RBP8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CACNA2D2Q9NY47 1150 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CALCOCO1Q9P1Z2 691 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SLC27A6Q9Y2P4 619 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 SPTBN2O15020 2390 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 EML5Q05BV3 1969 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 TCRBV21S2A2A0A5A6 115 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 LGALS16A8MUM7 142 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 IRAK2O43187 625 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 SART1O43290 800 aaKnown RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 GFPT2O94808 682 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 LATS1O95835 1130 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 TRUB2O95900 331 aaKnown RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 MOCS2O96007 188 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 CYBBP04839 570 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 RETP07949 1114 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 MMEP08473 750 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 HOXB2P14652 356 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 CHRNB2P17787 502 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 GABRG2P18507 467 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 HLA-FP30511 346 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 NTSR1P30989 418 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 CDH5P33151 784 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 KRT9P35527 623 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 JAM2P57087 298 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 POLR2FP61218 127 aaKnown RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 YWHAZP63104 245 aaKnown RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 RING1Q06587 406 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 MAP7D1Q3KQU3 841 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 PLK5Q496M5 336 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 HSF5Q4G112 596 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 MPPE1Q53F39 396 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 EOGTQ5NDL2 527 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 PIK3R6Q5UE93 754 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 OTUD1Q5VV17 481 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 NUGGCQ68CJ6 796 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 RNF43Q68DV7 783 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 OR6B2Q6IFH4 312 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 BEND5Q7L4P6 421 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 CACNA2D4Q7Z3S7 1137 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 DHX40Q8IX18 779 aaKnown RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 CHPFQ8IZ52 775 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 ABCA7Q8IZY2 2146 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 EPS8L1Q8TE68 723 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 HMGB4Q8WW32 186 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 GABRG3Q99928 467 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 SMOC1Q9H4F8 434 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 POPDC2Q9HBU9 364 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 NLRC4Q9NPP4 1024 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 CD93Q9NPY3 652 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 MBD1Q9UIS9 605 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 NOCTQ9UK39 431 aaKnown RBP8.43□□□□□ -1.06
VTI1B-206ENST00000556461 GMEB2Q9UKD1 530 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 RAB23Q9ULC3 237 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 TLR6Q9Y2C9 796 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 NCOR2Q9Y618 2525 aa8.43□□□□□ -1.06
VTI1B-206ENST00000556461 SYNJ2BP-COX16A0A087WUM0 186 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 LRRC10BA6NIK2 292 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 CAPN9O14815 690 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 TEX33O43247 280 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 TBL1XO60907 577 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 EPN2O95208 641 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 PRKCHP24723 683 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 CD70P32970 193 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 IL12RB1P42701 662 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 SLC11A2P49281 568 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 BPIFB4P59827 614 aa8.42□□□□□ -1.06
VTI1B-206ENST00000556461 RPS24P62847 133 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms