RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 PPM1JQ5JR12 505 aa15.3■□□□□ 0.04
CUX1-215ENST00000556210 EFHC1Q5JVL4 640 aa15.3■□□□□ 0.04
CUX1-215ENST00000556210 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
CUX1-215ENST00000556210 CLPTM1LQ96KA5 538 aa15.3■□□□□ 0.04
CUX1-215ENST00000556210 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
CUX1-215ENST00000556210 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
CUX1-215ENST00000556210 DPPA5A6NC42 116 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 SPTLC1O15269 473 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 TSPAN3O60637 253 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 KLRC2P26717 231 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 GPD2P43304 727 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 ZNF157P51786 506 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 GPX6P59796 221 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 ART3Q13508 389 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 MAP7Q14244 749 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 PDCD2Q16342 344 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 CXCL17Q6UXB2 119 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 PLPPR4Q7Z2D5 763 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 TFAP2DQ7Z6R9 452 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 ABI1Q8IZP0 508 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 MPP5Q8N3R9 675 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CCDC185Q8N715 623 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CDHR5Q9HBB8 845 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 IRAK4Q9NWZ3 460 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 CITO14578 2027 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 EME2A4GXA9 379 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 PHGDHO43175 533 aaKnown RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 MSX2P35548 267 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 STILQ15468 1287 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 PCDH19Q8TAB3 1148 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CAB39LQ9H9S4 337 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CHST12Q9NRB3 414 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 GRID1Q9ULK0 1009 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 STARD13Q9Y3M8 1113 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CXorf49A8MYA2 514 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 PGK1P00558 417 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CD4P01730 458 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 APOEP02649 317 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 ATICP31939 592 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 KLF1Q13351 362 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 PDK1Q15118 436 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 WASHC2DQ5SRD0 308 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 SCG3Q8WXD2 468 aaKnown RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 PEBP4Q96S96 227 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 CCDC134Q9H6E4 229 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 ARL8BQ9NVJ2 186 aa15.29■□□□□ 0.04
CUX1-215ENST00000556210 NKX1-2Q9UD57 310 aaPredicted RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 MTO1Q9Y2Z2 717 aaKnown RBP15.29■□□□□ 0.04
CUX1-215ENST00000556210 BUD23O43709 281 aaKnown RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 HNRNPCL1O60812 293 aaKnown RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 THPOP40225 353 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 RANBP1P43487 201 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 PLK1P53350 603 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 SH2D4BQ5SQS7 431 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 SDHAF4Q5VUM1 108 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 NKD2Q969F2 451 aaPredicted RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 APOPT1Q96IL0 206 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 SARS2Q9NP81 518 aaKnown RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 FZD9O00144 591 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 TREHO43280 583 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 METTL18O95568 372 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 BDNFP23560 247 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 ICAM3P32942 547 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 PGGT1BP53609 377 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 UBAP2LQ14157 1087 aaKnown RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.28■□□□□ 0.04
CUX1-215ENST00000556210 STKLD1Q8NE28 680 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 EPAS1Q99814 870 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 ADA2Q9NZK5 511 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 C2CD2Q9Y426 696 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 DNAJC6O75061 913 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 KRT36O76013 467 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 AP2B1P63010 937 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 PEX6Q13608 980 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 C15orf39Q6ZRI6 1047 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 TLK2Q86UE8 772 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 ST13P4Q8IZP2 240 aaPredicted RBP15.28■□□□□ 0.04
CUX1-215ENST00000556210 GSDMBQ8TAX9 411 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 INPP5DQ92835 1189 aa15.28■□□□□ 0.04
CUX1-215ENST00000556210 STBD1O95210 358 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 CACNA2D1P54289 1103 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 SV2CQ496J9 727 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 TTC30AQ86WT1 665 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 NMUR2Q9GZQ4 415 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 FZD8Q9H461 694 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 TSPAN1O60635 241 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 ASMTLO95671 621 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 ATP6V1C1P21283 382 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 SKIV2L2P42285 1042 aaKnown RBP15.27■□□□□ 0.04
CUX1-215ENST00000556210 TCHHL1Q5QJ38 904 aaPredicted RBP15.27■□□□□ 0.04
CUX1-215ENST00000556210 SLC35B2Q8TB61 432 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 PTPRN2Q92932 1015 aa15.27■□□□□ 0.04
CUX1-215ENST00000556210 CENPKQ9BS16 269 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms