RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 THAP10Q9P2Z0 257 aaPredicted RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 PLA2G4CQ9UP65 541 aa16.09■□□□□ 0.17
SNX6-205ENST00000555648 ATXN2Q99700 1313 aaKnown RBP16.09■□□□□ 0.17
SNX6-205ENST00000555648 CAPN9O14815 690 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 TM4SF5O14894 197 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 KCNK5O95279 499 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 ACADMP11310 421 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 NCAM1P13591 858 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 ITPKAP23677 461 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 IL12RB1P42701 662 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 ACADSBP45954 432 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 MAPK8P45983 427 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
SNX6-205ENST00000555648 TBX4P57082 545 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 PSAPL1Q6NUJ1 521 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 ENOSF1Q7L5Y1 443 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 FAM217AQ8IXS0 508 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 ZNF557Q8N988 423 aaPredicted RBP16.08■□□□□ 0.16
SNX6-205ENST00000555648 WFIKKN2Q8TEU8 576 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 PRCCQ92733 491 aaPredicted RBP16.08■□□□□ 0.16
SNX6-205ENST00000555648 FOXJ1Q92949 421 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 PIWIL1Q96J94 861 aaKnown RBP16.08■□□□□ 0.16
SNX6-205ENST00000555648 CNTNAP3BQ96NU0 1288 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 CNTNAP3Q9BZ76 1288 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 KIAA1468Q9P260 1216 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 RWDD2AQ9UIY3 292 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 SLC6A14Q9UN76 642 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 MYO16Q9Y6X6 1858 aa16.08■□□□□ 0.16
SNX6-205ENST00000555648 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
SNX6-205ENST00000555648 EPHX1P07099 455 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 GNSP15586 552 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 CD6P30203 668 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 USP8P40818 1118 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 ZNF234Q14588 700 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 FUT11Q495W5 492 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 FNDC3BQ53EP0 1204 aaKnown RBP16.07■□□□□ 0.16
SNX6-205ENST00000555648 WDR45BQ5MNZ6 344 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 N4BP2L1Q5TBK1 243 aaPredicted RBP16.07■□□□□ 0.16
SNX6-205ENST00000555648 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 TMPRSS6Q8IU80 811 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 HDDC3Q8N4P3 179 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 SIPA1Q96FS4 1042 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 HSPA12BQ96MM6 686 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 GTPBP2Q9BX10 602 aaKnown RBP16.07■□□□□ 0.16
SNX6-205ENST00000555648 SLC6A17Q9H1V8 727 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 TMEM74BQ9NUR3 256 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 SUSD2Q9UGT4 822 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 PILRBQ9UKJ0 227 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
SNX6-205ENST00000555648 MYOFQ9NZM1 2061 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 RALGAPA1Q6GYQ0 2036 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 IRAK2O43187 625 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 THAP12O43422 761 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 CALCAP01258 141 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 ATP5BP06576 529 aaKnown RBP16.06■□□□□ 0.16
SNX6-205ENST00000555648 ENGP17813 658 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
SNX6-205ENST00000555648 OXTRP30559 389 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
SNX6-205ENST00000555648 SH3PXD2AQ5TCZ1 1133 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 SLC23A3Q6PIS1 610 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 CHST9Q7L1S5 443 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 SCUBE3Q8IX30 993 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 SORCS1Q8WY21 1168 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 KREMEN1Q96MU8 473 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 ZSWIM1Q9BR11 485 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 IRX2Q9BZI1 471 aaPredicted RBP16.06■□□□□ 0.16
SNX6-205ENST00000555648 SLC32A1Q9H598 525 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 ABCB8Q9NUT2 735 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 GGA2Q9UJY4 613 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 STOML2Q9UJZ1 356 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 CLEC4EQ9ULY5 219 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 SPAG17Q6Q759 2223 aa16.06■□□□□ 0.16
SNX6-205ENST00000555648 MEI4A8MW99 385 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 ACSL4O60488 711 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 TBL1XO60907 577 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 SYPP08247 313 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 SERPINF2P08697 491 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 PABPC1P11940 636 aaKnown RBP16.05■□□□□ 0.16
SNX6-205ENST00000555648 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
SNX6-205ENST00000555648 GNA15P30679 374 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 RING1Q06587 406 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 ARHGAP44Q17R89 818 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
SNX6-205ENST00000555648 AHI1Q8N157 1196 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 MLKLQ8NB16 471 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 CLEC4CQ8WTT0 213 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 TOE1Q96GM8 510 aaKnown RBP16.05■□□□□ 0.16
SNX6-205ENST00000555648 MED15Q96RN5 788 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 CD248Q9HCU0 757 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 STIM2Q9P246 746 aa16.05■□□□□ 0.16
SNX6-205ENST00000555648 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
SNX6-205ENST00000555648 CDX4O14627 284 aaPredicted RBP16.04■□□□□ 0.16
SNX6-205ENST00000555648 APOEP02649 317 aa16.04■□□□□ 0.16
SNX6-205ENST00000555648 CSRP1P21291 193 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms