RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SLC7A9P82251 487 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
SHMT2-220ENST00000555634 TFDP2Q14188 446 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 PRSS36Q5K4E3 855 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 RABGAP1LQ5R372 815 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-220ENST00000555634 CHSY1Q86X52 802 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 CMTM8Q8IZV2 173 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-220ENST00000555634 MNS1Q8NEH6 495 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 ING5Q8WYH8 240 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 ACSF2Q96CM8 615 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-220ENST00000555634 HAPLN3Q96S86 360 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 OSBPL9Q96SU4 736 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 PSMB7Q99436 277 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 ZNF670Q9BS34 389 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 LRRC3Q9BY71 257 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 CATSPERBQ9H7T0 1116 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 PRDM16Q9HAZ2 1276 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 WDR6Q9NNW5 1121 aaKnown RBP11.61□□□□□ -0.55
SHMT2-220ENST00000555634 SMPD4Q9NXE4 827 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
SHMT2-220ENST00000555634 KIF26AQ9ULI4 1882 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-220ENST00000555634 KCNU1A8MYU2 1149 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ZNF487B1APH4 448 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 EEF2KO00418 725 aaKnown RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 FGF10O15520 208 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CEP104O60308 925 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ZNF189O75820 626 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 TJP3O95049 919 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 IGLV3-27P01718 113 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CYBBP04839 570 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 RARAP10276 462 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ZFXP17010 805 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CEBPBP17676 345 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 GBP2P32456 591 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 SERPINB6P35237 376 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ADRA1BP35368 520 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 TAS2R40P59535 323 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CBX2Q14781 532 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 DPYSL2Q16555 572 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ZC3H12AQ5D1E8 599 aaKnown RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 TFDP3Q5H9I0 405 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 KCNT1Q5JUK3 1230 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 SH3PXD2AQ5TCZ1 1133 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 OTUD1Q5VV17 481 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 DAB2IPQ5VWQ8 1189 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 MTSS1LQ765P7 747 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 BNIPLQ7Z465 357 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 TMEM150AQ86TG1 271 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CCDC185Q8N715 623 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ZSCAN18Q8TBC5 510 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CD101Q93033 1021 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 FERMT1Q9BQL6 677 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 TDP1Q9NUW8 608 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 KLHL11Q9NVR0 708 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 THG1LQ9NWX6 298 aaKnown RBP11.6□□□□□ -0.55
SHMT2-220ENST00000555634 ARHGEF38Q9NXL2 777 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 FZD10Q9ULW2 581 aa11.6□□□□□ -0.55
SHMT2-220ENST00000555634 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 CREB3O43889 395 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 PAGE1O75459 146 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 TBX18O95935 607 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 GJA1P17302 382 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 TFE3P19532 575 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 CHKAP35790 457 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 PITX1P78337 314 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 NTHL1P78549 312 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 SMAD4Q13485 552 aaKnown RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 ADGRE1Q14246 886 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 PPP2R5EQ16537 467 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 WHAMMP3Q1A5X7 153 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 SLC5A9Q2M3M2 681 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 CCDC70Q6NSX1 233 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 RWDD4Q6NW29 188 aaKnown RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 SYCE2Q6PIF2 218 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 BZW1Q7L1Q6 419 aaKnown RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 OTOP3Q7RTS5 596 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 YAF2Q8IY57 180 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 CELF5Q8N6W0 485 aaKnown RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 KIAA1958Q8N8K9 716 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 ZNF557Q8N988 423 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 SMRP1Q8NCR6 262 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 KRT35Q92764 455 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 SMARCD2Q92925 531 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 HLA-CQ95604 372 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 AZIN2Q96A70 460 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 OTUB2Q96DC9 234 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 TBC1D31Q96DN5 1066 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 TCEAL4Q96EI5 215 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 FCRL2Q96LA5 508 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-220ENST00000555634 TLR10Q9BXR5 811 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 SIK2Q9H0K1 926 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 CFAP97Q9P2B7 532 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms