RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 TBCAO75347 108 aaKnown RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 GPC1P35052 558 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 DDIT3P35638 169 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 CTSKP43235 329 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 GRIA4P48058 902 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 CSNK1EP49674 416 aaKnown RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 AFF3P51826 1226 aaKnown RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 ZNF132P52740 706 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 SLC5A3P53794 718 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 CFHR1Q03591 330 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 SHBQ15464 509 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 RILPL1Q5EBL4 403 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 LAYNQ6UX15 382 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 ERICH1Q86X53 443 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 NUP93Q8N1F7 819 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 VWA5B2Q8N398 1253 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 ZMIZ2Q8NF64 920 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 IGSF8Q969P0 613 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 FBXO32Q969P5 355 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 CDK5RAP3Q96JB5 506 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 KCNK16Q96T55 309 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 SEMA4CQ9C0C4 833 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 TM9SF3Q9HD45 589 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 OSER1Q9NX31 292 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 LIMCH1Q9UPQ0 1083 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-218ENST00000555628 SH3BP1Q9Y3L3 701 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 LRRK2Q5S007 2527 aa9.61□□□□□ -0.87
PRKCH-218ENST00000555628 FRMD3A2A2Y4 597 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 GOLGA8IPA6NC78 632 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 GOLGA8JA6NMD2 632 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 H0Y8X5 98 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 RTN3O95197 1032 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 ABL1P00519 1130 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 KRT19P08727 400 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 PTPN1P18031 435 aaKnown RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 PRKCHP24723 683 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 DGKGP49619 791 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 ACADVLP49748 655 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 MFAP3P55082 362 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 GNL2Q13823 731 aaKnown RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 GEN1Q17RS7 908 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 SDE2Q6IQ49 451 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 FBXL19Q6PCT2 694 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 TMPRSS6Q8IU80 811 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 LURAP1LQ8IV03 231 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 B3GALNT2Q8NCR0 500 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 LARP4BQ92615 738 aaKnown RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 XYLT2Q9H1B5 865 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 C6orf106Q9H6K1 298 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 ETNK1Q9HBU6 452 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 OLFML3Q9NRN5 406 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 SEL1LQ9UBV2 794 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 CHORDC1Q9UHD1 332 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-218ENST00000555628 ANKRD6Q9Y2G4 727 aa9.6□□□□□ -0.87
PRKCH-218ENST00000555628 CBX4O00257 560 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 KCNK3O14649 394 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 TLR5O60602 858 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 TBX18O95935 607 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 TMEM191BP0C7N4 346 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 IRF1P10914 325 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 OXTRP30559 389 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 ACSL1P33121 698 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-218ENST00000555628 CCT8P50990 548 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 SRSF1Q07955 248 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRKCH-218ENST00000555628 TMEM215Q68D42 235 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 GPR155Q7Z3F1 870 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 FAM35AQ86V20 835 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 CBWD2Q8IUF1 395 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 WBP1Q96G27 269 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 ACCSQ96QU6 501 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 KIF2CQ99661 725 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 NUP58Q9BVL2 599 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 ZHX3Q9H4I2 956 aa9.59□□□□□ -0.87
PRKCH-218ENST00000555628 COL27A1Q8IZC6 1860 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 USP9XQ93008 2570 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 A0A1B0GTQ1 180 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 NPC1O15118 1278 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 TSPAN3O60637 253 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 BEST1O76090 585 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 LDHAP00338 332 aaKnown RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-218ENST00000555628 KLKB1P03952 638 aa9.58□□□□□ -0.88
PRKCH-218ENST00000555628 HOXD13P35453 343 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms