RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 EDC3Q96F86 508 aaKnown RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 PRR11Q96HE9 360 aaPredicted RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 PIGSQ96S52 555 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 EIF2AK1Q9BQI3 630 aaKnown RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 RNF26Q9BY78 433 aaPredicted RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 CIPCQ9C0C6 399 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 ABHD16BQ9H3Z7 469 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 WASH6PQ9NQA3 447 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 TRPC5Q9UL62 973 aaPredicted RBP6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 FZD4Q9ULV1 537 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 CRYL1Q9Y2S2 319 aa6.1□□□□□ -1.43
CKS1BP1-201ENST00000555221 FAM90A20PA6NIJ5 464 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 SAC3D1A6NKF1 404 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 PRAMEF2O60811 474 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 RHOBTB3O94955 611 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 PDE8BO95263 885 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC3A2P08195 630 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 CYP3A4P08684 503 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 XBP1P17861 261 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 CNTFP26441 200 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 GALNSP34059 522 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 PCP4P48539 62 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 RARRES1P49788 294 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 COPB1P53618 953 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 SOX10P56693 466 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 VAMP2P63027 116 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 RAE1P78406 368 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 SIM1P81133 766 aaPredicted RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 TRPC3Q13507 836 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 CTXN3Q4LDR2 81 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 RNASE12Q5GAN4 147 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 INTS11Q5TA45 600 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 MAP3K21Q5TCX8 1036 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 CPOQ8IVL8 374 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 LINC01465Q8N7H1 131 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 TERB1Q8NA31 727 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 PPM1MQ96MI6 270 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 TWNKQ96RR1 684 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 MMS19Q96T76 1030 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 ABHD10Q9NUJ1 306 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 PACSIN3Q9UKS6 424 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 RAB21Q9UL25 225 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 VPS4AQ9UN37 437 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC12A4Q9UP95 1085 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 ENTPD2Q9Y5L3 495 aa6.09□□□□□ -1.43
CKS1BP1-201ENST00000555221 TTC34A8MYJ7 566 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 PRRG2O14669 202 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 HOXC11O43248 304 aaPredicted RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 TSPAN3O60637 253 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 FZD7O75084 574 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 ALDOAP04075 364 aaKnown RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 POLBP06746 335 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 CNPP09543 421 aaKnown RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 APEHP13798 732 aaKnown RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 TACR2P21452 398 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 DDIT3P35638 169 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 FAM3BP58499 235 aaPredicted RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 TAS2R50P59544 299 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 PDCLQ13371 301 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 DCTN1Q14203 1278 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 RALBP1Q15311 655 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 ZXDCQ2QGD7 858 aaPredicted RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 CEP85Q6P2H3 762 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 ZNF627Q7L945 461 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 RASAL3Q86YV0 1011 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 SRFBP1Q8NEF9 429 aaKnown RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 KTI12Q96EK9 354 aaPredicted RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 MAELQ96JY0 434 aaKnown RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 HS6ST2Q96MM7 605 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 BBC3Q96PG8 261 aaPredicted RBP6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 ADGRE3Q9BY15 652 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 SLC17A6Q9P2U8 582 aa6.08□□□□□ -1.44
CKS1BP1-201ENST00000555221 NCANO14594 1321 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 CCDC196A0A1B0GTZ2 297 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 EXOC3O60645 756 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 HEXIM1O94992 359 aaKnown RBP6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 MT-CO3P00414 261 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 MBPP02686 304 aaPredicted RBP6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 GCP02774 474 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 TNFRSF1AP19438 455 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 CXCR5P32302 372 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 RCAN1P53805 252 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 FOXL2P58012 376 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 CYP4F2P78329 520 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 CHRNDQ07001 517 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 PUM1Q14671 1186 aaKnown RBP eCLIP6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 TSTD2Q5T7W7 516 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 NAPRTQ6XQN6 538 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 TRIM72Q6ZMU5 477 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 Q6ZPA2 131 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 BBS12Q6ZW61 710 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 BCDIN3DQ7Z5W3 292 aaKnown RBP6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 TMTC1Q8IUR5 882 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 ESX1Q8N693 406 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 PTGR2Q8N8N7 351 aaPredicted RBP6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 MAFAQ8NHW3 353 aaPredicted RBP6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 CAGE1Q8TC20 777 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 TRMT61AQ96FX7 289 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms