RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GOLGA6AQ9NYA3 693 aa9.22□□□□□ -0.93
TDP1-210ENST00000554976 CLUHO75153 1309 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 HACD1B0YJ81 288 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 SMAPO00193 183 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 NDC80O14777 642 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 TRIM66O15016 1216 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 CHADO15335 359 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 TRAPPC3O43617 180 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 ZDHHC11BP0C7U3 371 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 DESP17661 470 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.93
TDP1-210ENST00000554976 BCAR1P56945 870 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 GPX6P59796 221 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 NRG1Q02297 640 aaPredicted RBP9.21□□□□□ -0.93
TDP1-210ENST00000554976 AUHQ13825 339 aaKnown RBP9.21□□□□□ -0.93
TDP1-210ENST00000554976 DENND2CQ68D51 928 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 EP400NLQ6ZTU2 488 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 KLHDC8BQ8IXV7 354 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 DCP1BQ8IZD4 617 aaKnown RBP9.21□□□□□ -0.93
TDP1-210ENST00000554976 NPWQ8N729 165 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 EDEM1Q92611 657 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 SLC39A13Q96H72 371 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 MAK16Q9BXY0 300 aaKnown RBP9.21□□□□□ -0.93
TDP1-210ENST00000554976 OXCT2Q9BYC2 517 aaPredicted RBP9.21□□□□□ -0.93
TDP1-210ENST00000554976 OSBPL2Q9H1P3 480 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 LGALS13Q9UHV8 139 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 SHROOM3Q8TF72 1996 aa9.21□□□□□ -0.93
TDP1-210ENST00000554976 TRIM43BA6NCK2 446 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 TADA2AO75478 443 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 F9P00740 461 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 RNASELQ05823 741 aaKnown RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 GPR17Q13304 367 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 ODF2Q5BJF6 829 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 PPP6R3Q5H9R7 873 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 FAM171A1Q5VUB5 890 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 AFMIDQ63HM1 303 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 RNF19BQ6ZMZ0 732 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 ZC3H18Q86VM9 953 aaKnown RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 TP53INP2Q8IXH6 220 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 STKLD1Q8NE28 680 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 EPS8L3Q8TE67 593 aaKnown RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 CASP10Q92851 521 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 TRIM43Q96BQ3 446 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 RBM15Q96T37 977 aaKnown RBP eCLIP9.21□□□□□ -0.94
TDP1-210ENST00000554976 PPP1R12CQ9BZL4 782 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 ROPN1BQ9BZX4 212 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 ROPN1Q9HAT0 212 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 ABCC13Q9NSE7 274 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 RAD54BQ9Y620 910 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 TBKBP1A7MCY6 615 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 KIAA0355O15063 1070 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 EIF3HO15372 352 aaKnown RBP eCLIP9.21□□□□□ -0.94
TDP1-210ENST00000554976 IGLV3-27P01718 113 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 MYZAPP0CAP1 466 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 HAPLN1P10915 354 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 HSPA8P11142 646 aaKnown RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 IBSPP21815 317 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 MAGEA4P43358 317 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 NME3Q13232 169 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 FAM182AQ5T1J6 154 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 KCTD16Q68DU8 428 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 SLC8B1Q6J4K2 584 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 DARS2Q6PI48 645 aaKnown RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 FBXO46Q6PJ61 603 aaPredicted RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 UBE2Q1Q7Z7E8 422 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 C2orf15Q8WU43 125 aaKnown RBP9.21□□□□□ -0.94
TDP1-210ENST00000554976 LRRN4Q8WUT4 740 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 TOP1MTQ969P6 601 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 DHRS4Q9BTZ2 278 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 COMMD8Q9NX08 183 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 MTRRQ9UBK8 725 aa9.21□□□□□ -0.94
TDP1-210ENST00000554976 A0A1W2PQH9 124 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 H3BRJ5 948 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 BANF1O75531 89 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 MYCP01106 439 aaPredicted RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 ALDH2P05091 517 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 CLTBP09497 229 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 ATF6P18850 670 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 PBX3P40426 434 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 ZNF135P52742 658 aaPredicted RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 WASHC5Q12768 1159 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 NFE2Q16621 373 aaPredicted RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 KYNUQ16719 465 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 CTXN3Q4LDR2 81 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 KCNT2Q6UVM3 1135 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 CDKL3Q8IVW4 592 aaPredicted RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 FAM76AQ8TAV0 307 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 RSAD2Q8WXG1 361 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 FAM193BQ96PV7 902 aaPredicted RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 TRIM62Q9BVG3 475 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 TTLL2Q9BWV7 592 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 DDIT4Q9NX09 232 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 PCDHB5Q9Y5E4 795 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 SNX10Q9Y5X0 201 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 MYO1CO00159 1063 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 KCNN4O15554 427 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 ADAM12O43184 909 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 METTL18O95568 372 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms