RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 STK33Q9BYT3 514 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 LHX5Q9H2C1 402 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 FAM204AQ9H8W3 233 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 COX16Q9P0S2 106 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 LIMA1Q9UHB6 759 aaKnown RBP11.1□□□□□ -0.63
SHMT2-213ENST00000554600 INVSQ9Y283 1065 aa11.1□□□□□ -0.63
SHMT2-213ENST00000554600 ADAMTS9Q9P2N4 1935 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 GOLGA6L7A0A1B0GV03 622 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TCRBV21S2A2A0A5A6 115 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TYW5A2RUC4 315 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 SMTNL1A8MU46 457 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 LGALS16A8MUM7 142 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 PRRT4C9JH25 899 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 F8VZ95 297 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 ACSL4O60488 711 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 LATS1O95835 1130 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TRUB2O95900 331 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 PENKP01210 267 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 FYNP06241 537 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 CISD3P0C7P0 127 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 HOXB2P14652 356 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 NTSR1P30989 418 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 GBP1P32455 592 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 ZNF445P59923 1031 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 CDK17Q00537 523 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 ARID5AQ03989 594 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 RING1Q06587 406 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TAF5Q15542 800 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 RFWD3Q6PCD5 774 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 FAM183BPQ6ZVS7 135 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 ANKS1BQ7Z6G8 1248 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TAC4Q86UU9 113 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 WDTC1Q8N5D0 677 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 PIWIL1Q96J94 861 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 NAA15Q9BXJ9 866 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 CIPCQ9C0C6 399 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 GANQ9H2C0 597 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 STIM2Q9P246 746 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 USP18Q9UMW8 372 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TLR6Q9Y2C9 796 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 NUMA1Q14980 2115 aa11.09□□□□□ -0.63
SHMT2-213ENST00000554600 TNRC6BQ9UPQ9 1833 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 CNOT1A5YKK6 2376 aaKnown RBP11.09□□□□□ -0.63
SHMT2-213ENST00000554600 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 SYCE3A1L190 88 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 DCLK1O15075 740 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 TBL1XO60907 577 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 HSF2BPO75031 334 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ADAM23O75077 832 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 IGLV3-27P01718 113 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ERBB2P04626 1255 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ATP1A3P13637 1013 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 HNRNPLP14866 589 aaKnown RBP eCLIP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF18P17022 549 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 STAT1P42224 750 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF165P49910 485 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 RNASE9P60153 205 aaKnown RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 NCAPHQ15003 741 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 GEN1Q17RS7 908 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 PTPN20Q4JDL3 420 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 USP39Q53GS9 565 aaKnown RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ZC3H12AQ5D1E8 599 aaKnown RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 SMYD5Q6GMV2 418 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 CACNA2D4Q7Z3S7 1137 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 NOP9Q86U38 636 aaKnown RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 KBTBD6Q86V97 674 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 CCDC117Q8IWD4 279 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 FAM217AQ8IXS0 508 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 FAM160A2Q8N612 972 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 MSANTD4Q8NCY6 345 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 P2RY11Q96G91 374 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 FCRL2Q96LA5 508 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-213ENST00000554600 ACOX2Q99424 681 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 SLC2A11Q9BYW1 496 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 DDIT4Q9NX09 232 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 CACNA2D2Q9NY47 1150 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 EBF1Q9UH73 591 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 SLC12A6Q9UHW9 1150 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 CLEC4EQ9ULY5 219 aa11.08□□□□□ -0.64
SHMT2-213ENST00000554600 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 GOLGA8SH3BPF8 625 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 EPHB6O15197 1021 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 IRAK2O43187 625 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 MAP3K13O43283 966 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 DAB1O75553 588 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 RETP07949 1114 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 GLI1P08151 1106 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 MMEP08473 750 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 PTMSP20962 102 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 HOXD9P28356 352 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SLC6A4P31645 630 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms