RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
SHMT2-205ENST00000553474 PLLPQ9Y342 182 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 Q9Y3F1 56 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 USP3Q9Y6I4 520 aa13.34□□□□□ -0.27
SHMT2-205ENST00000553474 H3BRJ5 948 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 I3L4J1 428 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 GOLGA8RI6L899 631 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 AVILO75366 819 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 LRPAP1P30533 357 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 CRHR1P34998 444 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 GLUD2P49448 558 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 CPT1AP50416 773 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 ZNF135P52742 658 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-205ENST00000553474 ARFIP2P53365 341 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 NRLP54845 237 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 GBE1Q04446 702 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 SNX17Q15036 470 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 NCBP2-AS2Q69YL0 99 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 UNC5AQ6ZN44 842 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 CDKL2Q92772 493 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 FAM111AQ96PZ2 611 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 KCTD15Q96SI1 283 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-205ENST00000553474 KATNAL1Q9BW62 490 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 MOCS1Q9NZB8 636 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 HTTP42858 3142 aa13.33□□□□□ -0.28
SHMT2-205ENST00000553474 HAS3O00219 553 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CLGNO14967 610 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CCDC22O60826 627 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 FBXO21O94952 628 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 DLDP09622 509 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 T-ENOLP0DO92 83 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 GNAT1P11488 350 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 NEFHP12036 1026 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CCDC130P13994 396 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CCNG1P51959 295 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CRYBB1P53674 252 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PRMT2P55345 433 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 KRT72Q14CN4 511 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PDK1Q15118 436 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 WASHC2DQ5SRD0 308 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PDZD4Q76G19 769 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ZNF534Q76KX8 674 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 MARK2Q7KZI7 788 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CTU1Q7Z7A3 348 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PRPF39Q86UA1 669 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 KIF2BQ8N4N8 673 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 SLC2A14Q8TDB8 520 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 AGAP11Q8TF27 550 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 KCNK4Q9NYG8 393 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 SIRPGQ9P1W8 387 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 MCM8Q9UJA3 840 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PIN4Q9Y237 131 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CENPFP49454 3210 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 TSC2P49815 1807 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 VGLL3A8MV65 326 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 NCAM2O15394 837 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 RFPL1O75677 317 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 HAUS5O94927 633 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 METTL18O95568 372 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 LMNAP02545 664 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 LCP1P13796 627 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 NPR3P17342 541 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ADORA2BP29275 332 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 GRK4P32298 578 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 SLC10A2Q12908 348 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 MFSD10Q14728 455 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 CTC1Q2NKJ3 1217 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ANKRD20A2Q5SQ80 823 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 LRRC8BQ6P9F7 803 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 KYAT3Q6YP21 454 aaKnown RBP13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PTPRN2Q92932 1015 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 STAMBPL1Q96FJ0 436 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 ADAM33Q9BZ11 813 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 PLAC1Q9HBJ0 212 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 RRN3Q9NYV6 651 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 STK38LQ9Y2H1 464 aa13.32□□□□□ -0.28
SHMT2-205ENST00000553474 WDR91A4D1P6 747 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 SDR42E2A6NKP2 422 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 DYNC1LI2O43237 492 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-205ENST00000553474 INHAP05111 366 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 PDGFRBP09619 1106 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 CALB2P22676 271 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms