RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 FSTL5Q8N475 847 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-217ENST00000553287 LINC01465Q8N7H1 131 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 FAM71DQ8N9W8 422 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 DENND1AQ8TEH3 1009 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 USP29Q9HBJ7 922 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 HEYLQ9NQ87 328 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-217ENST00000553287 GAR1Q9NY12 217 aaKnown RBP5.56□□□□□ -1.52
ATXN3-217ENST00000553287 RALGAPBQ86X10 1494 aa5.56□□□□□ -1.52
ATXN3-217ENST00000553287 POM121BA6NF01 834 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 FCHO1O14526 889 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 TMEM225BP0DP42 221 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 ATF7P17544 494 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-217ENST00000553287 ADRA1DP25100 572 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 RBL1P28749 1068 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 MMP13P45452 471 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 COPAP53621 1224 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 FHL3Q13643 280 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-217ENST00000553287 CLCA4Q14CN2 919 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 LARS2Q15031 903 aaKnown RBP5.55□□□□□ -1.52
ATXN3-217ENST00000553287 C16orf71Q8IYS4 520 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-217ENST00000553287 PNPLA1Q8N8W4 532 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 ZNF398Q8TD17 642 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 EDC3Q96F86 508 aaKnown RBP5.55□□□□□ -1.52
ATXN3-217ENST00000553287 LRRC46Q96FV0 321 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 C8orf48Q96LL4 319 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 TBCBQ99426 244 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 FAM118BQ9BPY3 351 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 SELENOOQ9BVL4 669 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 SARGQ9BW04 601 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 SLC25A32Q9H2D1 315 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 CAMTA1Q9Y6Y1 1673 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 COL22A1Q8NFW1 1626 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-217ENST00000553287 COL15A1P39059 1388 aa5.55□□□□□ -1.52
ATXN3-217ENST00000553287 MYOM2P54296 1465 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-217ENST00000553287 CA12O43570 354 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 BCAR3O75815 825 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 SLC5A1P13866 664 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 ATP5F1P24539 256 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-217ENST00000553287 KCNB1Q14721 858 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 MFSD13AQ14CX5 517 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 TRIP6Q15654 476 aaKnown RBP5.54□□□□□ -1.52
ATXN3-217ENST00000553287 LRCH2Q5VUJ6 765 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 VSTM1Q6UX27 236 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 LIX1LQ8IVB5 337 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 CCDC33Q8N5R6 958 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 PNISRQ8TF01 805 aaKnown RBP5.54□□□□□ -1.52
ATXN3-217ENST00000553287 GJB4Q9NTQ9 266 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 DCCP43146 1447 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 PTCH1Q13635 1447 aa5.54□□□□□ -1.52
ATXN3-217ENST00000553287 APAF1O14727 1248 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 FYB1O15117 783 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 COQ9O75208 318 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 RNF8O76064 485 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 HTR7P34969 479 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 STT3AP46977 705 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 PRIM2P49643 509 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 CASP5P51878 434 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 GPC5P78333 572 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 GHRHRQ02643 423 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 KRTAP1-1Q07627 177 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 SAFBQ15424 915 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATXN3-217ENST00000553287 GRHL2Q6ISB3 625 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 P3H2Q8IVL5 708 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 CCAR1Q8IX12 1150 aaKnown RBP5.53□□□□□ -1.52
ATXN3-217ENST00000553287 CCDC150Q8NCX0 1101 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 MBD3L2Q8NHZ7 208 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-217ENST00000553287 SUN3Q8TAQ9 357 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-217ENST00000553287 PRR11Q96HE9 360 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-217ENST00000553287 ZBTB26Q9HCK0 441 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 TMOD4Q9NZQ9 345 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 PIK3R4Q99570 1358 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 ANKRD30AQ9BXX3 1397 aa5.53□□□□□ -1.52
ATXN3-217ENST00000553287 LAMC1P11047 1609 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 ZNF521Q96K83 1311 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 A0A087WZ62 844 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 PPEF2O14830 753 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 MOSPD3O75425 235 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 WDR47O94967 919 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 TOP3BO95985 862 aaKnown RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 FGFR2P21802 821 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 TXNL4AP83876 142 aaKnown RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 MTAPQ13126 283 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 ACOX1Q15067 660 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 EPHA10Q5JZY3 1008 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 CC2D1BQ5T0F9 858 aaKnown RBP5.52□□□□□ -1.53
ATXN3-217ENST00000553287 TMTC4Q5T4D3 741 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 CRTC1Q6UUV9 634 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 BEND5Q7L4P6 421 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 KRT27Q7Z3Y8 459 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 GLCCI1Q86VQ1 547 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 UNC5CLQ8IV45 518 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 RNF152Q8N8N0 203 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 MAP4K1Q92918 833 aa5.52□□□□□ -1.53
ATXN3-217ENST00000553287 KAZALD1Q96I82 304 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms