RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NT5C3BQ969T7 300 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 RSPRY1Q96DX4 576 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 C1orf74Q96LT6 269 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 LRRC3BQ96PB8 259 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 HAPLN3Q96S86 360 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 CNPY3Q9BT09 278 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 LRFN3Q9BTN0 628 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 HPS4Q9NQG7 708 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 AGO1Q9UL18 857 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 SLC27A6Q9Y2P4 619 aa10.67□□□□□ -0.7
TRAFD1-208ENST00000552890 F5H5T6 163 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 M0QYT0 321 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 PIK3R2O00459 728 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 IGLV3-25P01717 112 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 CDC25BP30305 580 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 CYLC1P35663 651 aaPredicted RBP10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 RNASE9P60153 205 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 DMC1Q14565 340 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 SLC18A3Q16572 532 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 GRAMD4Q6IC98 578 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 ALKBH5Q6P6C2 394 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 MON1BQ7L1V2 547 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 SPEM1Q8N4L4 309 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 CTNNBL1Q8WYA6 563 aaPredicted RBP10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 SLC39A13Q96H72 371 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 ZFYVE19Q96K21 471 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 PANX2Q96RD6 677 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 C11orf70Q9BRQ4 267 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 ISCUQ9H1K1 167 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 LINC00597Q9H2U6 94 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 ARHGEF4Q9NR80 690 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 ABHD10Q9NUJ1 306 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 ADAMTS1Q9UHI8 967 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 SFMBT1Q9UHJ3 866 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 TMEM59LQ9UK28 342 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 FBXO4Q9UKT5 387 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 INTUQ9ULD6 942 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 NAALADL1Q9UQQ1 740 aa10.66□□□□□ -0.7
TRAFD1-208ENST00000552890 TBC1D3BA6NDS4 549 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 CHURC1-FNTBB4DL54 471 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 NEDD8-MDP1E9PL57 170 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 GOLGA8SH3BPF8 625 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 NRG2O14511 850 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 LAMTOR5O43504 91 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 GREM1O60565 184 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 MFAP3LO75121 409 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ENDOD1O94919 500 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 PENKP01210 267 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ATP5BP06576 529 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 HMBSP08397 361 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 TYRP14679 529 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ARSAP15289 507 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 GPD1P21695 349 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ETFBP38117 255 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 DGKGP49619 791 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 CXCR3P49682 368 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SULT1E1P49888 294 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ZNF75DP51815 510 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 PTPN5P54829 565 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 GSDMDP57764 484 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ZXDBP98169 803 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SULT2A1Q06520 285 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 TNK2Q07912 1038 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SPA17Q15506 151 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ZNF528Q3MIS6 628 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 TRIM68Q6AZZ1 485 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 POTEHQ6S545 545 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 ZNF571Q7Z3V5 609 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 TMC6Q7Z403 805 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 TAC4Q86UU9 113 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 TMTC1Q8IUR5 882 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 PSTKQ8IV42 348 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 DTWD2Q8NBA8 298 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 CLEC4CQ8WTT0 213 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 NPY6RQ99463 290 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SYT11Q9BT88 431 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 CHRDQ9H2X0 955 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SEMA4AQ9H3S1 761 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 LMAN1LQ9HAT1 526 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 UVRAGQ9P2Y5 699 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 NUDT5Q9UKK9 219 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 SLC8A2Q9UPR5 921 aa10.65□□□□□ -0.7
TRAFD1-208ENST00000552890 CCDC163A0A0D9SF12 145 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CXorf51AA0A1B0GTR3 108 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 C2CD4BA6NLJ0 364 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 GFRA2O00451 464 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 MDM4O15151 490 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 CLDN11O75508 207 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 GABBR2O75899 941 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 ALDH1A2O94788 518 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 KAT7O95251 611 aa10.64□□□□□ -0.71
TRAFD1-208ENST00000552890 PAPSS2O95340 614 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms