RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MAP3K21Q5TCX8 1036 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 RFX8Q6ZV50 586 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 ANKS4BQ8N8V4 417 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 ADAM32Q8TC27 787 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 MZB1Q8WU39 189 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 RSPH1Q8WYR4 309 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 IRGQQ8WZA9 623 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 LRRC39Q96DD0 335 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 TGS1Q96RS0 853 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 LGMNQ99538 433 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 PKMYT1Q99640 499 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 SRRDQ9UH36 339 aa14.49□□□□□ -0.09
RAB3IP-216ENST00000552199 A0A0A0MRY4 1105 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 INPPL1O15357 1258 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 TYROBPO43914 113 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 SNX3O60493 162 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 BDNFP23560 247 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 PDK1Q15118 436 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 PRKD1Q15139 912 aaPredicted RBP14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 ANKRD20A2Q5SQ80 823 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 ANKRD20A1Q5TYW2 823 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 ANKRD20A3Q5VUR7 823 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 PM20D1Q6GTS8 502 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 DCLRE1AQ6PJP8 1040 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 CTU1Q7Z7A3 348 aaKnown RBP14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 SMC1BQ8NDV3 1235 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 HASPINQ8TF76 798 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 SLC44A1Q8WWI5 657 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 CFAP36Q96G28 342 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 SUSD3Q96L08 255 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 SPATA13Q96N96 652 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 TMLHEQ9NVH6 421 aa14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 ZC3H7BQ9UGR2 993 aaKnown RBP14.48□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM72CH0Y354 149 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 DCLK1O15075 740 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 F9P00740 461 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 OAS1P00973 400 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 GSTA2P09210 222 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 KRT4P19013 534 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 TAC1P20366 129 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FOXN2P32314 431 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 RPA3P35244 121 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FDFT1P37268 417 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 GLUD2P49448 558 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 LIG3P49916 1009 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 SEMA3BQ13214 749 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 KBTBD12Q3ZCT8 623 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM72AQ5TYM5 149 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM72DQ6L9T8 149 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 ZNF534Q76KX8 674 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM72BQ86X60 149 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 THEM5Q8N1Q8 247 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 SCML4Q8N228 414 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 ANLNQ9NQW6 1124 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 RGS18Q9NS28 235 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 DDIT4Q9NX09 232 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 TTLL3Q9Y4R7 772 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 NR2E3Q9Y5X4 410 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 ARHGEF37A1IGU5 675 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 CCT8L1PA6NM43 557 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 I6L893 689 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 TRDMT1O14717 391 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 CKBP12277 381 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 CA4P22748 312 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 HOXD10P28358 340 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 GBP2P32456 591 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 HCAR3P49019 387 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 SPARCL1Q14515 664 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 OVOS1Q6IE37 1185 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 PRPF39Q86UA1 669 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 RTN4RL1Q86UN2 441 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 LRRTM3Q86VH5 581 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 OR10T2Q8NGX3 314 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 PPM1EQ8WY54 764 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 CCT6BQ92526 530 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 EDEM1Q92611 657 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 P2RY11Q96G91 374 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 SIGLEC10Q96LC7 697 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 TMEM209Q96SK2 561 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 PAIP2Q9BPZ3 127 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 RASSF4Q9H2L5 321 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 KDM4CQ9H3R0 1056 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 PLAC1Q9HBJ0 212 aa14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 XAB2Q9HCS7 855 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 DMAP1Q9NPF5 467 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAB3IP-216ENST00000552199 FRMPD3Q5JV73 1810 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 PTPRDP23468 1912 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 COL4A4P53420 1690 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 IQANK1A0A1B0GTG1 560 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 PPP1R12AO14974 1030 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 STK10O94804 968 aaKnown RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 FSBPO95073 299 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 C1QAP02745 245 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 ITGB1P05556 798 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 ERCC2P18074 760 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 TYMPP19971 482 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 YY1P25490 414 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms