RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 TPSB2P20231 275 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SNX16P57768 344 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SESN2P58004 480 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 STX3Q13277 289 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 THOC5Q13769 683 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 TPSAB1Q15661 275 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 NT5DC4Q86YG4 428 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 FAM161BQ96MY7 647 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 WWP1Q9H0M0 922 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 TUT1Q9H6E5 874 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 XAB2Q9HCS7 855 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 NMRK1Q9NWW6 199 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SYNJ2BP-COX16A0A087WUM0 186 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 ENO4A6NNW6 628 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 ZFXP17010 805 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 CRHR1P34998 444 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 INHBEP58166 350 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 CBLBQ13191 982 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SNX30Q5VWJ9 437 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 C4orf22Q6V702 233 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 FAM131BQ86XD5 332 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 ANKRD13AQ8IZ07 590 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 ADGRF2Q8IZF7 708 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 NDRG1Q92597 394 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 QKIQ96PU8 341 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 C16orf70Q9BSU1 422 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 EIF2AQ9BY44 585 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 COX16Q9P0S2 106 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 ANKRD33BA6NCL7 494 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 PSMG1O95456 288 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 VAV1P15498 845 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 LMO2P25791 158 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 PTPN9P43378 593 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 NR2C2P49116 596 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SERPINB9P50453 376 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 GRIK4Q16099 956 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 AP1ARQ63HQ0 302 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 RBM15BQ8NDT2 890 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 HTR3CQ8WXA8 447 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 APBB2Q92870 758 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 EBF4Q9BQW3 602 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 SEPT10Q9P0V9 454 aa13.45□□□□□ -0.26
CACNB3-219ENST00000551544 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
CACNB3-219ENST00000551544 CITO14578 2027 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 SPDYE5A6NIY4 337 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 TBX10O75333 385 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 VHLP40337 213 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 SEMA5AQ13591 1074 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 SLC26A9Q7LBE3 791 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 ZDHHC17Q8IUH5 632 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 PPTC7Q8NI37 304 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 RNF217Q8TC41 542 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 NRG4Q8WWG1 115 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 FAM149B1Q96BN6 582 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 FAM124BQ9H5Z6 455 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 MKS1Q9NXB0 559 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 PCNTO95613 3336 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 LYPLA1O75608 230 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 ARL4AP40617 200 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 RPL10AP62906 217 aaKnown RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 MXRA7P84157 204 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 AP1B1Q10567 949 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 BST2Q10589 180 aaKnown RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 UBAP2LQ14157 1087 aaKnown RBP13.44□□□□□ -0.26
CACNB3-219ENST00000551544 MARCH8Q5T0T0 291 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 CATSPER4Q7RTX7 472 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 ARHGAP24Q8N264 748 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 COLGALT1Q8NBJ5 622 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 BEST2Q8NFU1 509 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 CLPTM1LQ96KA5 538 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 TMPRSS4Q9NRS4 437 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 MOCS1Q9NZB8 636 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 IL1RAPL1Q9NZN1 696 aa13.44□□□□□ -0.26
CACNB3-219ENST00000551544 MYO18AQ92614 2054 aaKnown RBP13.43□□□□□ -0.26
CACNB3-219ENST00000551544 KLHL33A6NCF5 533 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 PRR5-ARHGAP8B1AHC4 643 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 SNNO75324 88 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-219ENST00000551544 KCNA4P22459 653 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 AKAP5P24588 427 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 MGAT1P26572 445 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 HOXA11P31270 313 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-219ENST00000551544 ARHGAP8P85298 464 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 SLC34A1Q06495 639 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 KLC1Q07866 573 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 RBBP5Q15291 538 aaKnown RBP13.43□□□□□ -0.26
CACNB3-219ENST00000551544 ZNF618Q5T7W0 954 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 N4BP2L1Q5TBK1 243 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-219ENST00000551544 SLC30A9Q6PML9 568 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 MAMDC4Q6UXC1 1216 aa13.43□□□□□ -0.26
CACNB3-219ENST00000551544 TMPRSS6Q8IU80 811 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms