RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 IGSF21Q96ID5 467 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 RRN3Q9NYV6 651 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 NINJ2Q9NZG7 142 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 BCLAF3A2AJT9 711 aaKnown RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 TRIM66O15016 1216 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 F9P00740 461 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 MAGEA11P43364 429 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 BASP1P80723 227 aaKnown RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 PPARDQ03181 441 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 IFFO1Q0D2I5 559 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 ELAVL2Q12926 359 aaKnown RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 MORF4L2Q15014 288 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 ANKS3Q6ZW76 656 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 NAT8LQ8N9F0 302 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 ZNF689Q96CS4 500 aaPredicted RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 RCOR3Q9P2K3 495 aaPredicted RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 SCML2Q9UQR0 700 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 LTBP2Q14767 1821 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 WDR27A2RRH5 827 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 SMIM23A6NLE4 172 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 DCLK1O15075 740 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 IRAK2O43187 625 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 VAV1P15498 845 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 ERCC2P18074 760 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 TERF2Q15554 542 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 KRT71Q3SY84 523 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 SPOUT1Q5T280 376 aaKnown RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 GIPC2Q8TF65 315 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 OLFM3Q96PB7 478 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 OR12D3Q9UGF7 316 aa20.37■□□□□ 0.85
SSH1-209ENST00000551165 XPO7Q9UIA9 1087 aaKnown RBP20.37■□□□□ 0.85
SSH1-209ENST00000551165 TBX18O95935 607 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 RAG1P15918 1043 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 ZFXP17010 805 aaPredicted RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 WDR5P61964 334 aaKnown RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 MSS51Q4VC12 460 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 SLC45A4Q5BKX6 768 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 FNBP1LQ5T0N5 605 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 TRMT10CQ7L0Y3 403 aaKnown RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 RNF168Q8IYW5 571 aaPredicted RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 EPS8L3Q8TE67 593 aaKnown RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 SAYSD1Q9NPB0 183 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 BCCIPQ9P287 314 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSH1-209ENST00000551165 TTC4O95801 387 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 MYZAPP0CAP1 466 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 OR1D2P34982 312 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 RFC2P35250 354 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 SLCO1A2P46721 670 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 FAM43BQ6ZT52 329 aaPredicted RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 BEND5Q7L4P6 421 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 OTOP2Q7RTS6 562 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 PPIL6Q8IXY8 311 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 NPWQ8N729 165 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 RTP4Q96DX8 246 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 SIK2Q9H0K1 926 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 SMOC2Q9H3U7 446 aa20.36■□□□□ 0.85
SSH1-209ENST00000551165 RC3H2Q9HBD1 1191 aaKnown RBP20.36■□□□□ 0.85
SSH1-209ENST00000551165 ABHD14A-ACY1A0A1B0GW23 586 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 HAPLN1P10915 354 aaPredicted RBP20.35■□□□□ 0.85
SSH1-209ENST00000551165 MAGEA4P43358 317 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 NR2C2P49116 596 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 ARL13BQ3SXY8 428 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 DENND5BQ6ZUT9 1274 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 ATP6V1G3Q96LB4 118 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 QKIQ96PU8 341 aaKnown RBP eCLIP20.35■□□□□ 0.85
SSH1-209ENST00000551165 SHOC2Q9UQ13 582 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 TLDC2A0PJX2 215 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 H7C4K7 107 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 LRIG2O94898 1065 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 ATF6P18850 670 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 AIF1P55008 147 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 TPI1P60174 286 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 PSMD5Q16401 504 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 USP41Q3LFD5 358 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 RASIP1Q5U651 963 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 NECAB2Q7Z6G3 386 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 MON1AQ86VX9 555 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 CCDC13Q8IYE1 715 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 SPPL2BQ8TCT7 592 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 CEP41Q9BYV8 373 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 RAB6BQ9NRW1 208 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 IL37Q9NZH6 218 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 MTRRQ9UBK8 725 aa20.35■□□□□ 0.85
SSH1-209ENST00000551165 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.35■□□□□ 0.85
SSH1-209ENST00000551165 PLXNA3P51805 1871 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 F5H423 210 aaPredicted RBP20.34■□□□□ 0.85
SSH1-209ENST00000551165 KIAA0355O15063 1070 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 METTL18O95568 372 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 TAF10Q12962 218 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 CLSTN3Q9BQT9 956 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 WDR83Q9BRX9 315 aaKnown RBP20.34■□□□□ 0.85
SSH1-209ENST00000551165 ARHGEF38Q9NXL2 777 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 SRGAP2BP0DMP2 458 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 YWHAQP27348 245 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 XRCC4Q13426 336 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 PAFAH1B3Q15102 231 aaKnown RBP20.34■□□□□ 0.85
SSH1-209ENST00000551165 ARTNQ5T4W7 220 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 ANKMY2Q8IV38 441 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 CDKL3Q8IVW4 592 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms