RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 IL12RB1P42701 662 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 EIF4EBP2Q13542 120 aaPredicted RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 USP39Q53GS9 565 aaKnown RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 SYPL2Q5VXT5 272 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 ENOSF1Q7L5Y1 443 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 KIAA0907Q7Z7F0 614 aaPredicted RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 TMEM110Q86TL2 294 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 TAC4Q86UU9 113 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 CHPFQ8IZ52 775 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 IPO4Q8TEX9 1081 aaKnown RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 STK32AQ8WU08 396 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 RNF139Q8WU17 664 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 SORCS1Q8WY21 1168 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 SLC39A13Q96H72 371 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 LMLNQ96KR4 655 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 PRICKLE1Q96MT3 831 aaPredicted RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 CPXM1Q96SM3 734 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 POLMQ9NP87 494 aaPredicted RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 CALCOCO1Q9P1Z2 691 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
NPAS3-209ENST00000551008 NAALADL1Q9UQQ1 740 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 STON1Q9Y6Q2 735 aa13.58□□□□□ -0.24
NPAS3-209ENST00000551008 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 FOXN3O00409 490 aaPredicted RBP13.57□□□□□ -0.24
NPAS3-209ENST00000551008 ALDH1A2O94788 518 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 FBXO21O94952 628 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 LATS1O95835 1130 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 PRKCHP24723 683 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 HLA-FP30511 346 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 GBP1P32455 592 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 CLCN1P35523 988 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 PTGER3P43115 390 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 RING1Q06587 406 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 PDCLQ13371 301 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 TAF5Q15542 800 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 ELF2Q15723 593 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 PREPLQ4J6C6 727 aaPredicted RBP13.57□□□□□ -0.24
NPAS3-209ENST00000551008 ADGRF1Q5T601 910 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 RFWD3Q6PCD5 774 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 TRMT11Q7Z4G4 463 aaKnown RBP13.57□□□□□ -0.24
NPAS3-209ENST00000551008 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 NETO1Q8TDF5 533 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 NDST4Q9H3R1 872 aa13.57□□□□□ -0.24
NPAS3-209ENST00000551008 THAP10Q9P2Z0 257 aaPredicted RBP13.57□□□□□ -0.24
NPAS3-209ENST00000551008 XPO7Q9UIA9 1087 aaKnown RBP13.57□□□□□ -0.24
NPAS3-209ENST00000551008 TPRP12270 2363 aaKnown RBP13.56□□□□□ -0.24
NPAS3-209ENST00000551008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 IGHV1OR15-9A0A0B4J2B8 117 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 RHOBTB1O94844 696 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
NPAS3-209ENST00000551008 LIMK1P53667 647 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 TBX4P57082 545 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 CREB5Q02930 508 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 ZNF234Q14588 700 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 FUT11Q495W5 492 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 VWA3BQ502W6 1294 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 MPPE1Q53F39 396 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 PIK3R6Q5UE93 754 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 BEND5Q7L4P6 421 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 ANKS1BQ7Z6G8 1248 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 ADIPOR2Q86V24 386 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 SLC47A2Q86VL8 602 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 PASD1Q8IV76 773 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 TMEFF1Q8IYR6 380 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 FAM71AQ8IYT1 594 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPAS3-209ENST00000551008 DDI1Q8WTU0 396 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 MRGPRX1Q96LB2 322 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 TUBGCP2Q9BSJ2 902 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 RTKNQ9BST9 563 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 NAA15Q9BXJ9 866 aaKnown RBP13.56□□□□□ -0.24
NPAS3-209ENST00000551008 SLC2A11Q9BYW1 496 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 ST7Q9NRC1 585 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 VPS45Q9NRW7 570 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 TMEM74BQ9NUR3 256 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 DNAJC12Q9UKB3 198 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 PCDHGC3Q9UN70 934 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 FHOD1Q9Y613 1164 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 DOCK4Q8N1I0 1966 aa13.56□□□□□ -0.24
NPAS3-209ENST00000551008 TP53BP1Q12888 1972 aaPredicted RBP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 LNP1A1A4G5 178 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 IRAK2O43187 625 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 ACSL4O60488 711 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 CAVIN2O95810 425 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 NCAM1P13591 858 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 ACADSBP45954 432 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 NNTQ13423 1086 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 PTPN20Q4JDL3 420 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 OTUD1Q5VV17 481 aaPredicted RBP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 CDKAL1Q5VV42 579 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 ARMCX6Q7L4S7 300 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 SLC41A1Q8IVJ1 513 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 FAM149B1Q96BN6 582 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms