RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CYLDQ9NQC7 956 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 KCNG1Q9UIX4 513 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 CDH9Q9ULB4 789 aa11.89□□□□□ -0.51
GPN3-208ENST00000550974 TLN1Q9Y490 2541 aaKnown RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 SPTBN1Q01082 2364 aaKnown RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 KRT7P08729 469 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 PLCG1P19174 1290 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 RPS6KB1P23443 525 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 DGKAP23743 735 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 EIF4HQ15056 248 aaKnown RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 SOWAHAQ2M3V2 549 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 C1QL3Q5VWW1 255 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 TMEM215Q68D42 235 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 RBM44Q6ZP01 1051 aaKnown RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 C1orf186Q6ZWK4 172 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 MAMDC2Q7Z304 686 aaPredicted RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 TOP6BLQ8N6T0 577 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 MFSD2AQ8NA29 543 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 OVCA2Q8WZ82 227 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 KLF16Q9BXK1 252 aaPredicted RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 FBXL12Q9NXK8 326 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 ORC3Q9UBD5 711 aaPredicted RBP11.88□□□□□ -0.51
GPN3-208ENST00000550974 DNM3Q9UQ16 869 aa11.88□□□□□ -0.51
GPN3-208ENST00000550974 A0A087X0B3 334 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 CCDC187A0A096LP49 1063 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 LRRC72A6NJI9 287 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 SEMA7AO75326 666 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 TBX18O95935 607 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 KRT19P08727 400 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 LIPCP11150 499 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 GNLYP22749 145 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 TUBP50607 506 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 EVCP57679 992 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 TFAMQ00059 246 aaKnown RBP11.87□□□□□ -0.51
GPN3-208ENST00000550974 GOLGA8FQ08AF8 430 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 GOLGA8DPQ0D2H9 430 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 MDH1BQ5I0G3 518 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 SNX30Q5VWJ9 437 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 ZNF776Q68DI1 518 aaPredicted RBP11.87□□□□□ -0.51
GPN3-208ENST00000550974 RBBP8NLQ8NC74 664 aaPredicted RBP11.87□□□□□ -0.51
GPN3-208ENST00000550974 OR2T34Q8NGX1 318 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 PIWIL1Q96J94 861 aaKnown RBP11.87□□□□□ -0.51
GPN3-208ENST00000550974 NEUROG2Q9H2A3 272 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 BRMS1Q9HCU9 246 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 PRSS16Q9NQE7 514 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 TMEM30AQ9NV96 361 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 EVA1BQ9NVM1 165 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 SEL1LQ9UBV2 794 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 SERGEFQ9UGK8 458 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 CKAP5Q14008 2032 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 LRRK1Q38SD2 2015 aa11.87□□□□□ -0.51
GPN3-208ENST00000550974 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 A0A1W2PP55 124 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 CPED1A4D0V7 1026 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 TIMM44O43615 452 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 TLR5O60602 858 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 MAGEC1O60732 1142 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 VPS4BO75351 444 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
GPN3-208ENST00000550974 PENKP01210 267 aaPredicted RBP11.86□□□□□ -0.51
GPN3-208ENST00000550974 GIMD1P0DJR0 217 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 C7P10643 843 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 ALPPL2P10696 532 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 MLLT10P55197 1068 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 SFSWAPQ12872 951 aaKnown RBP11.86□□□□□ -0.51
GPN3-208ENST00000550974 FYB2Q5VWT5 728 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 USP30Q70CQ3 517 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 CSGALNACT2Q8N6G5 542 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 SCAMP5Q8TAC9 235 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 GOLGA1Q92805 767 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 POM121Q96HA1 1249 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 PABPC3Q9H361 631 aaKnown RBP11.86□□□□□ -0.51
GPN3-208ENST00000550974 FBRSQ9HAH7 460 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 TUBD1Q9UJT1 453 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 CLEC4EQ9ULY5 219 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 PLA2G4CQ9UP65 541 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 PCDHGA7Q9Y5G6 932 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 U3KQA8 63 aa11.86□□□□□ -0.51
GPN3-208ENST00000550974 ARID1BQ8NFD5 2236 aaPredicted RBP11.86□□□□□ -0.51
GPN3-208ENST00000550974 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 H0YCG3 227 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 CCR5P51681 352 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 CDKN3Q16667 212 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 ADALQ6DHV7 355 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 CAPRIN2Q6IMN6 1127 aaKnown RBP11.85□□□□□ -0.51
GPN3-208ENST00000550974 NAPEPLDQ6IQ20 393 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 SLC39A4Q6P5W5 647 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 C1orf127Q8N9H9 656 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 C9orf43Q8TAL5 461 aaPredicted RBP11.85□□□□□ -0.51
GPN3-208ENST00000550974 SNX29Q8TEQ0 813 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 KBTBD7Q8WVZ9 684 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms