RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 BHMTQ93088 406 aa23.42■■□□□ 1.34
BRF1-216ENST00000550208 CFAP57Q96MR6 1250 aa23.42■■□□□ 1.34
BRF1-216ENST00000550208 BBS2Q9BXC9 721 aa23.42■■□□□ 1.34
BRF1-216ENST00000550208 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.42■■□□□ 1.349e-7■■■■■ 39.4
BRF1-216ENST00000550208 ZNHIT6Q9NWK9 470 aaKnown RBP23.42■■□□□ 1.34
BRF1-216ENST00000550208 MARK1Q9P0L2 795 aa23.42■■□□□ 1.34
BRF1-216ENST00000550208 XPO7Q9UIA9 1087 aaKnown RBP23.42■■□□□ 1.34
BRF1-216ENST00000550208 STAP1Q9ULZ2 295 aa23.42■■□□□ 1.34
BRF1-216ENST00000550208 A0A087X0T9 212 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 KCNU1A8MYU2 1149 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 HOXC11O43248 304 aaPredicted RBP23.41■■□□□ 1.34
BRF1-216ENST00000550208 TSPAN3O60637 253 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 LATS1O95835 1130 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 MOCS2O96007 188 aaPredicted RBP23.41■■□□□ 1.34
BRF1-216ENST00000550208 FAM228BP0C875 321 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 CHRNB1P11230 501 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 PDGFRAP16234 1089 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 RFC1P35251 1148 aaPredicted RBP23.41■■□□□ 1.34
BRF1-216ENST00000550208 SLC11A2P49281 568 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 SLC25A52Q3SY17 297 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 TMEM196Q5HYL7 178 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 NADSYN1Q6IA69 706 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 FSTL4Q6MZW2 842 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 DNAJC24Q6P3W2 148 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 RNF34Q969K3 372 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 CHP1Q99653 195 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 ISCUQ9H1K1 167 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 PLK2Q9NYY3 685 aa23.41■■□□□ 1.34
BRF1-216ENST00000550208 C2CD4BA6NLJ0 364 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 NEDD8-MDP1E9PL57 170 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 TYRP14679 529 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 SLC6A4P31645 630 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 ATXN1P54253 815 aaKnown RBP23.4■■□□□ 1.34
BRF1-216ENST00000550208 CCDC14Q49A88 953 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 CNGA4Q8IV77 575 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 CLDN23Q96B33 292 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 RBM12Q9NTZ6 932 aaKnown RBP23.4■■□□□ 1.34
BRF1-216ENST00000550208 PIGVQ9NUD9 493 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 DLGAP2Q9P1A6 1054 aa23.4■■□□□ 1.34
BRF1-216ENST00000550208 GFRA2O00451 464 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 NCAM2O15394 837 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 ATMINO43313 823 aaPredicted RBP23.39■■□□□ 1.33
BRF1-216ENST00000550208 F9P00740 461 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 EGFP01133 1207 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 APOEP02649 317 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 CCR1P32246 355 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 CXCR3P49682 368 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 ATP11AP98196 1134 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 DEUP1Q05D60 604 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 MESP2Q0VG99 397 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 GRSF1Q12849 480 aaKnown RBP eCLIP23.39■■□□□ 1.33
BRF1-216ENST00000550208 C15orf59Q2T9L4 293 aaPredicted RBP23.39■■□□□ 1.33
BRF1-216ENST00000550208 RAB6CQ53S08 254 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 FAM133BQ5BKY9 247 aaKnown RBP23.39■■□□□ 1.33
BRF1-216ENST00000550208 PPP1R15BQ5SWA1 713 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 FYB2Q5VWT5 728 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 RFWD3Q6PCD5 774 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 ETFBKMTQ8IXQ9 262 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 ATP6V0D2Q8N8Y2 350 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 TC2NQ8N9U0 490 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 PGAP3Q96FM1 320 aaPredicted RBP23.39■■□□□ 1.33
BRF1-216ENST00000550208 PNKPQ96T60 521 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 RAB6CQ9H0N0 254 aa23.39■■□□□ 1.33
BRF1-216ENST00000550208 TRIM24O15164 1050 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 TULP3O75386 442 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 ENDOD1O94919 500 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 ADCY5O95622 1261 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 SLC2A3P11169 496 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 RPL7AP62424 266 aaKnown RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 MAPK8IP2Q13387 824 aaPredicted RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 MAMLD1Q13495 774 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 PPP2R5DQ14738 602 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 ASTE1Q2TB18 679 aaPredicted RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 CCDC122Q5T0U0 273 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 SH3PXD2AQ5TCZ1 1133 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 PLEKHA7Q6IQ23 1121 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 ALKBH5Q6P6C2 394 aaKnown RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 BNIPLQ7Z465 357 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 DDI1Q8WTU0 396 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 EZH1Q92800 747 aaPredicted RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 EXOC4Q96A65 974 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 TMA16Q96EY4 203 aaKnown RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 BTN2A3PQ96KV6 586 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 XPO6Q96QU8 1125 aaKnown RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 CNOT8Q9UFF9 292 aaKnown RBP23.38■■□□□ 1.33
BRF1-216ENST00000550208 SLC12A6Q9UHW9 1150 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 ZDBF2Q9HCK1 2354 aa23.38■■□□□ 1.33
BRF1-216ENST00000550208 PENKP01210 267 aaPredicted RBP23.37■■□□□ 1.33
BRF1-216ENST00000550208 CYBBP04839 570 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 ABCB4P21439 1286 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 GPD1P21695 349 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 DRD1P21728 446 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 SDC4P31431 198 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 SGSHP51688 502 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 GFPT1Q06210 699 aaPredicted RBP23.37■■□□□ 1.33
BRF1-216ENST00000550208 CCINQ13939 588 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 MPPE1Q53F39 396 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 DGKKQ5KSL6 1271 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 PIK3R6Q5UE93 754 aa23.37■■□□□ 1.33
BRF1-216ENST00000550208 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms