RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 RAB30Q15771 203 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 KCTD19Q17RG1 926 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 PDE12Q6L8Q7 609 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 NPNTQ6UXI9 565 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 PLD5Q8N7P1 536 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 ACTL9Q8TC94 416 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 ANKRD7Q92527 254 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 OSBPL2Q9H1P3 480 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 STIM2Q9P246 746 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-213ENST00000550064 RAB21Q9UL25 225 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 DNPEPQ9ULA0 475 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
CACNB3-213ENST00000550064 SLC12A8A0AV02 714 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 ZSCAN5CA6NGD5 496 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 BHMG1C9JSJ3 638 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 C1RP00736 705 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 APOC2P02655 101 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 F11P03951 625 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 SLC2A3P11169 496 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 TGM2P21980 687 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 ATP5C1P36542 298 aaKnown RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 PPP3CCP48454 512 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 HCAR3P49019 387 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 VCPP55072 806 aaKnown RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 VSNL1P62760 191 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 NNTQ13423 1086 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 DPYSQ14117 519 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 PPM1LQ5SGD2 360 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 WDR93Q6P2C0 686 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 DRICH1Q6PGQ1 229 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 JAMLQ86YT9 394 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 HS6ST3Q8IZP7 471 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 ATL2Q8NHH9 583 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 SLC35B2Q8TB61 432 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 SLC22A17Q8WUG5 538 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 SLCO2A1Q92959 643 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 NKD2Q969F2 451 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 HAPLN3Q96S86 360 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 TRIM51Q9BSJ1 452 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 LRRC3Q9BY71 257 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 FRMD8P1Q9BZ68 369 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 EPB41L5Q9HCM4 733 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 GDF3Q9NR23 364 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 ARHGEF4Q9NR80 690 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 ETNK2Q9NVF9 386 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 OR12D3Q9UGF7 316 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 XPO7Q9UIA9 1087 aaKnown RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 DNMT3LQ9UJW3 386 aa12.55□□□□□ -0.4
CACNB3-213ENST00000550064 DRG1Q9Y295 367 aaKnown RBP12.55□□□□□ -0.4
CACNB3-213ENST00000550064 CEP290O15078 2479 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 MYO7AQ13402 2215 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 CCL16O15467 120 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 COCHO43405 550 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ECEL1O95672 775 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 IGLV3-27P01718 113 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 TUBBP07437 444 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 HMBSP08397 361 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 EPCAMP16422 314 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 GGCXP38435 758 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 TUBP50607 506 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF135P52742 658 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 TPI1P60174 286 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 NOMO1Q15155 1222 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 TRADDQ15628 312 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 PPP2R2DQ66LE6 453 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 NCBP2-AS2Q69YL0 99 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 KLHDC10Q6PID8 442 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 CCNI2Q6ZMN8 369 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 RFX8Q6ZV50 586 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 TMC8Q8IU68 726 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 GRK7Q8WTQ7 553 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ARNTL2Q8WYA1 636 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 RUBCNQ92622 972 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 P3H4Q92791 437 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 EPAS1Q99814 870 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ERP44Q9BS26 406 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 SIK2Q9H0K1 926 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 PRDM16Q9HAZ2 1276 aa12.54□□□□□ -0.4
CACNB3-213ENST00000550064 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-213ENST00000550064 ZNF148Q9UQR1 794 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms