RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 EBF2Q9HAK2 575 aa11.13□□□□□ -0.63
TROAP-210ENST00000549534 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
TROAP-210ENST00000549534 NLGN3Q9NZ94 848 aa11.13□□□□□ -0.63
TROAP-210ENST00000549534 FBXO10Q9UK96 956 aa11.13□□□□□ -0.63
TROAP-210ENST00000549534 CFAP45Q9UL16 551 aa11.13□□□□□ -0.63
TROAP-210ENST00000549534 NCKAP1Q9Y2A7 1128 aa11.13□□□□□ -0.63
TROAP-210ENST00000549534 PTPRJQ12913 1337 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 TTC26A0AVF1 554 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 TTLL8A6PVC2 850 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 PIRO00625 290 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 SYT1P21579 422 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 PRKCHP24723 683 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 UGT1A5P35504 534 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 CCR5P51681 352 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 SEPT6Q14141 434 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 ZNF234Q14588 700 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 EIF4HQ15056 248 aaKnown RBP11.12□□□□□ -0.63
TROAP-210ENST00000549534 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 EIF2S3LQ2VIR3 472 aaKnown RBP11.12□□□□□ -0.63
TROAP-210ENST00000549534 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 USP30Q70CQ3 517 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 RAB11FIP2Q7L804 512 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 FBXO18Q8NFZ0 1043 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 PDCD6IPQ8WUM4 868 aaKnown RBP11.12□□□□□ -0.63
TROAP-210ENST00000549534 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 TCTN2Q96GX1 697 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 SERAC1Q96JX3 654 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 C5orf34Q96MH7 638 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 EPAS1Q99814 870 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 ACBD6Q9BR61 282 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 KIFC3Q9BVG8 833 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 TMEM134Q9H6X4 195 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 LATS2Q9NRM7 1088 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 SCML1Q9UN30 329 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 U3KQA8 63 aa11.12□□□□□ -0.63
TROAP-210ENST00000549534 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 NEMP2A6NFY4 417 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 LRRC72A6NJI9 287 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 EFCAB7A8K855 629 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 C10orf142B7Z368 130 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 PPEF2O14830 753 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 WNT9AO14904 365 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 GIMD1P0DJR0 217 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 CYP11B2P19099 503 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 CDC27P30260 824 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 SPAG1Q07617 926 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 NTRK3Q16288 839 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 BMT2Q1RMZ1 405 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 C9orf57Q5W0N0 161 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 WSCD1Q658N2 575 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 SERPINA13PQ6UXR4 307 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 SPATA2LQ8IUW3 424 aaPredicted RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 SCN4BQ8IWT1 228 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 ADGRF2Q8IZF7 708 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 HAS1Q92839 578 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 NAP1L4Q99733 375 aaKnown RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 TARS2Q9BW92 718 aaKnown RBP11.11□□□□□ -0.63
TROAP-210ENST00000549534 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 SEL1LQ9UBV2 794 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 SLC5A6Q9Y289 635 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 NUMA1Q14980 2115 aa11.11□□□□□ -0.63
TROAP-210ENST00000549534 CITO14578 2027 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 FFAR2O15552 330 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 TIMM44O43615 452 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 ABL1P00519 1130 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 CLTAP09496 248 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 CXCL8P10145 99 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 RARGP13631 454 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 LEPRP48357 1165 aaKnown RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 PDX1P52945 283 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 GALCP54803 685 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 RPS14P62263 151 aaKnown RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 ZNF177Q13360 481 aaPredicted RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 NAPEPLDQ6IQ20 393 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 VSTM1Q6UX27 236 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 GDF7Q7Z4P5 450 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 OR2T34Q8NGX1 318 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 PRR7Q8TB68 274 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 GPBAR1Q8TDU6 330 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 APOBEC4Q8WW27 367 aaKnown RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 PYM1Q9BRP8 204 aaKnown RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 B3GNT4Q9C0J1 378 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 STRADBQ9C0K7 418 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 PPM1HQ9ULR3 514 aa11.1□□□□□ -0.63
TROAP-210ENST00000549534 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
TROAP-210ENST00000549534 MAP4K5Q9Y4K4 846 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms