RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
PTCH1-218ENST00000548945 PLXNB3Q9ULL4 1909 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 A0A1W2PQ27 194 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 A0A1W2PQ64 194 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 SLC12A8A0AV02 714 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 METTL12A8MUP2 240 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 SH3BP5O60239 455 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 HMBSP08397 361 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 TRIP4Q15650 581 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-218ENST00000548945 IL27RAQ6UWB1 636 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 KRBA2Q6ZNG9 492 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 GLRX5Q86SX6 157 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 NAXDQ8IW45 347 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 CHCHD4Q8N4Q1 142 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 DDI1Q8WTU0 396 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 ADAMTS14Q8WXS8 1223 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 SEMA4DQ92854 862 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
PTCH1-218ENST00000548945 MMRN2Q9H8L6 949 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 STOML2Q9UJZ1 356 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
PTCH1-218ENST00000548945 PCDHB9Q9Y5E1 797 aa13.45□□□□□ -0.26
PTCH1-218ENST00000548945 MUC22E2RYF6 1773 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-218ENST00000548945 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 XPO1O14980 1071 aaKnown RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 CETN3O15182 167 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 CER1O95813 267 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 LATS1O95835 1130 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 CAPNS1P04632 268 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 ACADMP11310 421 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 MAOBP27338 520 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 HARS2P49590 506 aaKnown RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 TKTL1P51854 596 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 COPAP53621 1224 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 BCAT1P54687 386 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 CAMK2GQ13555 558 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 BECN1Q14457 450 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 MPPE1Q53F39 396 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 WFIKKN2Q8TEU8 576 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 CCDC34Q96HJ3 373 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 ARID3AQ99856 593 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 SCAND2PQ9GZW5 306 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 FBRSQ9HAH7 460 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 RALYQ9UKM9 306 aaKnown RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 APOBEC2Q9Y235 224 aaKnown RBP13.44□□□□□ -0.26
PTCH1-218ENST00000548945 COQ4Q9Y3A0 265 aa13.44□□□□□ -0.26
PTCH1-218ENST00000548945 BCAT2O15382 392 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-218ENST00000548945 CBFA2T3O75081 653 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 EPHX1P07099 455 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 FTH1P19P0C7X4 201 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 PRKCHP24723 683 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 HOXD9P28356 352 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-218ENST00000548945 YWHAEP62258 255 aaKnown RBP13.43□□□□□ -0.26
PTCH1-218ENST00000548945 ARID5AQ03989 594 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 BST2Q10589 180 aaKnown RBP13.43□□□□□ -0.26
PTCH1-218ENST00000548945 DCAF12L1Q5VU92 463 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 TMEM215Q68D42 235 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 SERPINA13PQ6UXR4 307 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 BHLHA9Q7RTU4 235 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 SCML4Q8N228 414 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 ZCCHC9Q8N567 271 aaKnown RBP13.43□□□□□ -0.26
PTCH1-218ENST00000548945 OR2T3Q8NH03 318 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 C1orf216Q8TAB5 229 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 CAMK1GQ96NX5 476 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 ULBP1Q9BZM6 244 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 HESX1Q9UBX0 185 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 KIAA1257Q9ULG3 409 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 CLEC4EQ9ULY5 219 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 PCDHGB2Q9Y5G2 931 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
PTCH1-218ENST00000548945 TMEM131Q92545 1883 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 SLC16A3O15427 465 aaKnown RBP13.42□□□□□ -0.26
PTCH1-218ENST00000548945 ZNF202O95125 648 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 MATKP42679 507 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 ZBTB16Q05516 673 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 CUL2Q13617 745 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 SGO2Q562F6 1265 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 MPP7Q5T2T1 576 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 ADGRF1Q5T601 910 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 DBX2Q6ZNG2 339 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 KIAA0907Q7Z7F0 614 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-218ENST00000548945 PROSER1Q86XN7 944 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 FMNL3Q8IVF7 1028 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTCH1-218ENST00000548945 RNF139Q8WU17 664 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 SORCS1Q8WY21 1168 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 KCTD13Q8WZ19 329 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 TATDN2Q93075 761 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 MIR1-1HGQ9H1L0 117 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 OSGEPQ9NPF4 335 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 CNGB3Q9NQW8 809 aa13.42□□□□□ -0.26
PTCH1-218ENST00000548945 ABCC13Q9NSE7 274 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms