RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 SH3GL1Q99961 368 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 ACBD6Q9BR61 282 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 MRPL45Q9BRJ2 306 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 PPANQ9NQ55 473 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 MARCH5Q9NX47 278 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 SPG21Q9NZD8 308 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 GRHL1Q9NZI5 618 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 RASAL2Q9UJF2 1139 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 CDV3Q9UKY7 258 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 SNX24Q9Y343 169 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 SCN1AP35498 2009 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 GMNCA6NCL1 334 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 MED7O43513 233 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 FOXD2O60548 495 aaPredicted RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 FGFR3P22607 806 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 IGFBP6P24592 240 aaPredicted RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 GNA15P30679 374 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 RAP1GAPP47736 663 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 PMS2P54278 862 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 PLTPP55058 493 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 MAGOHP61326 146 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 RACK1P63244 317 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 FMO1Q01740 532 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 KRT17Q04695 432 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 MESDQ14696 234 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 CYP1B1Q16678 543 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 ODF2Q5BJF6 829 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 OVOS1Q6IE37 1185 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 TTC27Q6P3X3 843 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 C6orf89Q6UWU4 347 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 SLC47A2Q86VL8 602 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 LRRC49Q8IUZ0 686 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 RNF168Q8IYW5 571 aaPredicted RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 SLC4A11Q8NBS3 891 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 OR8H1Q8NGG4 311 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 FBXO25Q8TCJ0 367 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 ZNF606Q8WXB4 792 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 MAGOHBQ96A72 148 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 CYFIP2Q96F07 1278 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 RBM18Q96H35 190 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 PLVAPQ9BX97 442 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 GPR62Q9BZJ7 368 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 TRIM8Q9BZR9 551 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 PABPC3Q9H361 631 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 ALG2Q9H553 416 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 DDX43Q9NXZ2 648 aaKnown RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 HCSTQ9UBK5 93 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 CHORDC1Q9UHD1 332 aaPredicted RBP6.82□□□□□ -1.32
CASC18-202ENST00000548557 METRNQ9UJH8 293 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 PCDHA3Q9Y5H8 950 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 PCDHA11Q9Y5I1 949 aa6.82□□□□□ -1.32
CASC18-202ENST00000548557 C5orf60A6NFR6 353 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 NT5C1B-RDH14C9J2C7 533 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 F8W810 466 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 EIF3FO00303 357 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 FSBPO95073 299 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 LINC00271P0C7V0 271 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PYGMP11217 842 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 POU3F3P20264 500 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 GBP1P32455 592 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 RPL21P46778 160 aaKnown RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 FNTAP49354 379 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 RWDD2BP57060 319 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 CDR2Q01850 454 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 IFFO1Q0D2I5 559 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 CNGA2Q16280 664 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 USP41Q3LFD5 358 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SEL1L2Q5TEA6 688 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 FAM171A1Q5VUB5 890 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PPP1R2P3Q6NXS1 205 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 FAM180BQ6P0A1 224 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 CCDC137Q6PK04 289 aaKnown RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 ANKS3Q6ZW76 656 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 ZNF564Q8TBZ8 553 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 DDX1Q92499 740 aaKnown RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 TIFAQ96CG3 184 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SAMD11Q96NU1 681 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 TTPALQ9BTX7 342 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 ELOVL4Q9GZR5 314 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 ACP6Q9NPH0 428 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 CDH9Q9ULB4 789 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PNMA8BQ9ULN7 279 aaPredicted RBP6.81□□□□□ -1.32
CASC18-202ENST00000548557 PCDHGC3Q9UN70 934 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 BOLA1Q9Y3E2 137 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 OR6C75A6NL08 312 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 C5orf67F2Z3F1 127 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 H7C4K7 107 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 I3L4J1 428 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SOD2P04179 222 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 SHBGP04278 402 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 RB1P06400 928 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 LMO2P25791 158 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 BMPR1AP36894 532 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 PBX3P40426 434 aa6.81□□□□□ -1.32
CASC18-202ENST00000548557 BYSLQ13895 437 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms