RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 SERTAD1Q9UHV2 236 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 AGO1Q9UL18 857 aaKnown RBP9.8□□□□□ -0.84
LETMD1-217ENST00000548516 STRIP2Q9ULQ0 834 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 ANKRD6Q9Y2G4 727 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 NFE2L3Q9Y4A8 694 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 PCDHGB2Q9Y5G2 931 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 NBEAQ8NFP9 2946 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 CABIN1Q9Y6J0 2220 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 IGSF10Q6WRI0 2623 aa9.8□□□□□ -0.84
LETMD1-217ENST00000548516 FLNBO75369 2602 aaKnown RBP9.79□□□□□ -0.84
LETMD1-217ENST00000548516 FAM47DPA6NHR8 397 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 H0Y8X5 98 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PDXKO00764 312 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 TNFSF14O43557 240 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PRB1P04280 392 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PSEN1P49768 467 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 VAMP7P51809 220 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 AFF3P51826 1226 aaKnown RBP9.79□□□□□ -0.84
LETMD1-217ENST00000548516 ZNF132P52740 706 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 CLDN6P56747 220 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 CLDN10P78369 228 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 STK4Q13043 487 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 E2F5Q15329 346 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 ZACNQ401N2 412 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PRAMEF14Q5SWL7 426 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 DBX2Q6ZNG2 339 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 SLC9A9Q8IVB4 645 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 KIAA0895Q8NCT3 520 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 ENGASEQ8NFI3 743 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 BAHD1Q8TBE0 780 aaPredicted RBP9.79□□□□□ -0.84
LETMD1-217ENST00000548516 TMC2Q8TDI7 906 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 SNX21Q969T3 373 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PAGE5Q96GU1 130 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PIWIL1Q96J94 861 aaKnown RBP9.79□□□□□ -0.84
LETMD1-217ENST00000548516 HEXIM2Q96MH2 286 aaKnown RBP9.79□□□□□ -0.84
LETMD1-217ENST00000548516 ARID3AQ99856 593 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 DUSP16Q9BY84 665 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 TM9SF3Q9HD45 589 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 SCUBE2Q9NQ36 999 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 MARCH2Q9P0N8 246 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PLA2G4CQ9UP65 541 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 PLXND1Q9Y4D7 1925 aa9.79□□□□□ -0.84
LETMD1-217ENST00000548516 KNTC1P50748 2209 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 PLK4O00444 970 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 IKBKBO14920 756 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 TIMM44O43615 452 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 ACTN4O43707 911 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 SEMA4FO95754 770 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 DNTTP04053 509 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 JUPP14923 745 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 PFKFB1P16118 471 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 NR2F2P24468 414 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 RPL13P26373 211 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 GRK6P43250 576 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 GCLMP48507 274 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 CCT8P50990 548 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 C21orf59P57076 290 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 SLC8A3P57103 927 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 YWHAGP61981 247 aaKnown RBP eCLIP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 DNM1Q05193 864 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 ENPP2Q13822 863 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 EIF4HQ15056 248 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 PPP1R26Q5T8A7 1209 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 TMEM215Q68D42 235 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 INTS8Q75QN2 995 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 CHST9Q7L1S5 443 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 CCDC186Q7Z3E2 898 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 GATAD2AQ86YP4 633 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 PDCD7Q8N8D1 485 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 C1orf216Q8TAB5 229 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 NDRG1Q92597 394 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 BIRC7Q96CA5 298 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 CCDC34Q96HJ3 373 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 BTBD1Q9H0C5 482 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 CYP3A43Q9HB55 503 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 APOBEC3GQ9HC16 384 aaKnown RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 PNPLA8Q9NP80 782 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 DMAC2Q9NW81 257 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 CLIC5Q9NZA1 410 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 FTSJ1Q9UET6 329 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-217ENST00000548516 AK5Q9Y6K8 562 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 PLXNB3Q9ULL4 1909 aa9.78□□□□□ -0.84
LETMD1-217ENST00000548516 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.85
LETMD1-217ENST00000548516 A0A1B0GVL5 298 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 IGLV3-19P01714 112 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 TRIM49P0CI25 452 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 TRIM49CP0CI26 452 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 ITPKBP27987 946 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 ABCG1P45844 678 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 RPS14P62263 151 aaKnown RBP9.77□□□□□ -0.85
LETMD1-217ENST00000548516 SEMG2Q02383 582 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 C19orf57Q0VDD7 668 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 CAMK2BQ13554 666 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 MPPE1Q53F39 396 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 KCNT1Q5JUK3 1230 aa9.77□□□□□ -0.85
LETMD1-217ENST00000548516 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms