RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 MARCKSL1P49006 195 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 SLC11A2P49281 568 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 CDH6P55285 790 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 NTHL1P78549 312 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 AMPD2Q01433 879 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 SLC5A9Q2M3M2 681 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 SMTNL2Q2TAL5 461 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 KCNT1Q5JUK3 1230 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 CYP4V2Q6ZWL3 525 aaPredicted RBP16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 CCDC50Q8IVM0 306 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 MICALL1Q8N3F8 863 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 CCDC185Q8N715 623 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 TCEAL4Q96EI5 215 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 C1orf74Q96LT6 269 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 NECTIN4Q96NY8 510 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 DDX50Q9BQ39 737 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 SLC46A2Q9BY10 475 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 OSBPL2Q9H1P3 480 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 DHX35Q9H5Z1 703 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 PRDM16Q9HAZ2 1276 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 GDE1Q9NZC3 331 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 RCOR3Q9P2K3 495 aaPredicted RBP16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 ARHGAP26Q9UNA1 814 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 ZNF510Q9Y2H8 683 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 NOTCH4Q99466 2003 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 C2orf16Q68DN1 1984 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 FANCGO15287 622 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 CEP104O60308 925 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 TBX10O75333 385 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 HMBSP08397 361 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 GJA1P17302 382 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 KDELR1P24390 212 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 PTPN7P35236 360 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 PAFAH1B1P43034 410 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 PPP2R5EQ16537 467 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 ATP13A4Q4VNC1 1196 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 TFDP3Q5H9I0 405 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 TXNRD3NBQ6F5E7 133 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 FAM71BQ8TC56 605 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 MAIP1Q8WWC4 291 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 CYP2S1Q96SQ9 504 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 PSMB7Q99436 277 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 CDX2Q99626 313 aaPredicted RBP16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 EPAS1Q99814 870 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 ZNF670Q9BS34 389 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 S1PR5Q9H228 398 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 KIF9Q9HAQ2 790 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 CDC23Q9UJX2 597 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 CPQQ9Y646 472 aa16.41■□□□□ 0.22
TRAFD1-203ENST00000547063 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 H3BRJ5 948 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 PAGE1O75459 146 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 STC2O76061 302 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 MOCS2O96007 188 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 PYGMP11217 842 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 FOSL2P15408 326 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 TCF3P15923 654 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 CEBPBP17676 345 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 L1CAMP32004 1257 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 CXCR5P32302 372 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 HCAR3P49019 387 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 NRG1Q02297 640 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 PPP6R3Q5H9R7 873 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 LRRC31Q6UY01 552 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 DEFB123Q8N688 67 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 KIAA1958Q8N8K9 716 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 RNF25Q96BH1 459 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 MSLNLQ96KJ4 702 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 SLC22A12Q96S37 553 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 APOL5Q9BWW9 433 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 CALN1Q9BXU9 219 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 MAK16Q9BXY0 300 aaKnown RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 STIM2Q9P246 746 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 OR12D3Q9UGF7 316 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 CD207Q9UJ71 328 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 TTC7AQ9ULT0 858 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 ZFP37Q9Y6Q3 630 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-203ENST00000547063 HELZP42694 1942 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 PGRMC1O00264 195 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 CORO1AP31146 461 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 LTBRP36941 435 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 ARSEP51690 589 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 KCNQ1P51787 676 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 MLLT6P55198 1093 aaPredicted RBP16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 CKAP4Q07065 602 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 TFDP2Q14188 446 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 WHAMMP3Q1A5X7 153 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 STXBP5Q5T5C0 1151 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 DCAF12L1Q5VU92 463 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 SPOCD1Q6ZMY3 1216 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 RASGEF1CQ8N431 466 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 ITFG1Q8TB96 612 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 ACTRT1Q8TDG2 376 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 ING5Q8WYH8 240 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 RAPGEF5Q92565 580 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms