RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 HOXD8P13378 290 aaPredicted RBP13.14□□□□□ -0.31
SCAF11-209ENST00000547018 VAV1P15498 845 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 PGFP49763 221 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 DDR2Q16832 855 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 FAM117BQ6P1L5 589 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 C16orf46Q6P387 395 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ZCCHC23Q6ZST2 131 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 TRPM8Q7Z2W7 1104 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF280BQ86YH2 543 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 HOMEZQ8IX15 550 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 HTR3CQ8WXA8 447 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 P2RY11Q96G91 374 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SNX3O60493 162 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ERCC2P18074 760 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 AXLP30530 894 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SCTRP47872 440 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 GATMP50440 423 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 E2F5Q15329 346 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ANKRD20A2Q5SQ80 823 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ANKRD20A1Q5TYW2 823 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ANKRD20A3Q5VUR7 823 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ARMC2Q8NEN0 867 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 AGR3Q8TD06 166 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 XPO1O14980 1071 aaKnown RBP13.13□□□□□ -0.31
SCAF11-209ENST00000547018 TAC1P20366 129 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 GPR15P49685 360 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 CKAP2Q8WWK9 683 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 PPP1R10Q96QC0 940 aaKnown RBP13.13□□□□□ -0.31
SCAF11-209ENST00000547018 TMEM109Q9BVC6 243 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 JCHAINP01591 159 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 KCNE1P15382 129 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 BGNP21810 368 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 GRK4P32298 578 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 ZBTB16Q05516 673 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 ITGA7Q13683 1181 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 ACAP1Q15027 740 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 SLC25A52Q3SY17 297 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 ARHGAP17Q68EM7 881 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 CAND1Q86VP6 1230 aaKnown RBP13.13□□□□□ -0.31
SCAF11-209ENST00000547018 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 CD99L2Q8TCZ2 262 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 AZIN2Q96A70 460 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 TMEM237Q96Q45 408 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 POPDC2Q9HBU9 364 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
SCAF11-209ENST00000547018 I6L893 689 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-209ENST00000547018 LTFP02788 710 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ACADSBP45954 432 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 TFAP2DQ7Z6R9 452 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 METTL23Q86XA0 190 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 CDKL3Q8IVW4 592 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-209ENST00000547018 PPP1R14CQ8TAE6 165 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 HNRNPABQ99729 332 aaKnown RBP13.12□□□□□ -0.31
SCAF11-209ENST00000547018 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-209ENST00000547018 DERAQ9Y315 318 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 LRRC37A2A6NM11 1700 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-209ENST00000547018 C9IYK1 514 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 C2CD2LO14523 706 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 GPR182O15218 404 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 GJA9P57773 515 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 PDE1BQ01064 536 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 SLC39A12Q504Y0 691 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 OR52K1Q8NGK4 314 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 OR10T2Q8NGX3 314 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 HSFY1Q96LI6 401 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 DNAI2Q9GZS0 605 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ACSS3Q9H6R3 686 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 SMYD2Q9NRG4 433 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 GDAP2Q9NXN4 497 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 MPP6Q9NZW5 540 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 OR12D3Q9UGF7 316 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 H3BRJ5 948 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 COPEO14579 308 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 SEPT4O43236 478 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 NOS2P35228 1153 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ITKQ08881 620 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ATAD1Q8NBU5 361 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 ERP27Q96DN0 273 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 FAM193BQ96PV7 902 aaPredicted RBP13.12□□□□□ -0.31
SCAF11-209ENST00000547018 TXNDC16Q9P2K2 825 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 DNAJB4Q9UDY4 337 aa13.12□□□□□ -0.31
SCAF11-209ENST00000547018 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 B4GALT3O60512 393 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 TBX18O95935 607 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 CSH1P0DML2 217 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms