RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 CHORDC1Q9UHD1 332 aaPredicted RBP14.02□□□□□ -0.17
RAB5B-203ENST00000546810 USP3Q9Y6I4 520 aa14.02□□□□□ -0.17
RAB5B-203ENST00000546810 LOC400499M0QZD8 3231 aa14.02□□□□□ -0.17
RAB5B-203ENST00000546810 UPK3BL1B0FP48 263 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 UPK3BL2E5RIL1 263 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 TULP2O00295 520 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 TADA3O75528 432 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 MMEP08473 750 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 USP17L7P0C7H9 530 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 RALAP11233 206 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 LCP1P13796 627 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 ARSAP15289 507 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 ENGP17813 658 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 ADIGQ0VDE8 80 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 PDCLQ13371 301 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 SNX30Q5VWJ9 437 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 NAIF1Q69YI7 327 aaPredicted RBP14.01□□□□□ -0.17
RAB5B-203ENST00000546810 TMEM150AQ86TG1 271 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 SCML4Q8N228 414 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 MAB21L3Q8N8X9 362 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 IRGQQ8WZA9 623 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
RAB5B-203ENST00000546810 CDK5RAP1Q96SZ6 601 aaKnown RBP14.01□□□□□ -0.17
RAB5B-203ENST00000546810 ULBP1Q9BZM6 244 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 SYNCQ9H7C4 482 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 NOCTQ9UK39 431 aaKnown RBP14.01□□□□□ -0.17
RAB5B-203ENST00000546810 BZW2Q9Y6E2 419 aaKnown RBP14.01□□□□□ -0.17
RAB5B-203ENST00000546810 LAMA5O15230 3695 aa14.01□□□□□ -0.17
RAB5B-203ENST00000546810 ASH1LQ9NR48 2969 aaKnown RBP14.01□□□□□ -0.17
RAB5B-203ENST00000546810 ASCC3Q8N3C0 2202 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 NUP205Q92621 2012 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 FREM2Q5SZK8 3169 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 GYPCP04921 128 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 CKMP06732 381 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 HDCP19113 662 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 CDH5P33151 784 aaPredicted RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 RPL34P49207 117 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 TUBP50607 506 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 ZNF75DP51815 510 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 KLHL30Q0D2K2 578 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 ZNF423Q2M1K9 1284 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 HECTD3Q5T447 861 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 TXNDC8Q6A555 127 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 PM20D1Q6GTS8 502 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 CC2D1AQ6P1N0 951 aaPredicted RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 RAB44Q7Z6P3 723 aaPredicted RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 RASSF3Q86WH2 238 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 CMTM8Q8IZV2 173 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 C1orf131Q8NDD1 294 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 ADAM32Q8TC27 787 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 HNRNPLLQ8WVV9 542 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 EZH1Q92800 747 aaPredicted RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 MRFAP1L1Q96HT8 127 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 PPP1R13BQ96KQ4 1090 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 AGPAT1Q99943 283 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 TRIM62Q9BVG3 475 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 SLC4A5Q9BY07 1137 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 NACA2Q9H009 215 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 KIF9Q9HAQ2 790 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 SEPT11Q9NVA2 429 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 ZNHIT6Q9NWK9 470 aaKnown RBP14□□□□□ -0.17
RAB5B-203ENST00000546810 CLIC5Q9NZA1 410 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 NAGPAQ9UK23 515 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 CCL26Q9Y258 94 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 IGSF10Q6WRI0 2623 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 ATG2BQ96BY7 2078 aa14□□□□□ -0.17
RAB5B-203ENST00000546810 ABCA7Q8IZY2 2146 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 A0A1W2PQH9 124 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 ZDHHC11BP0C7U3 371 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 TNFAIP3P21580 790 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 CASP14P31944 242 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 GJA4P35212 333 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 PRKCIP41743 596 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 DAOAP59103 153 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 YWHAGP61981 247 aaKnown RBP eCLIP13.99□□□□□ -0.17
RAB5B-203ENST00000546810 FAM193AP78312 1265 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 PDGFRLQ15198 375 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 BTBD8Q5XKL5 378 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 ANO7Q6IWH7 933 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 PPP1R2P3Q6NXS1 205 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 LPCAT2Q7L5N7 544 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 TMC6Q7Z403 805 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 IRF2BP2Q7Z5L9 587 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 VPS36Q86VN1 386 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 ERICH1Q86X53 443 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 ZDHHC17Q8IUH5 632 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 SYT12Q8IV01 421 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 HDDC3Q8N4P3 179 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 WDTC1Q8N5D0 677 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 ARL14EPQ8N8R7 260 aaPredicted RBP13.99□□□□□ -0.17
RAB5B-203ENST00000546810 SLC20A1Q8WUM9 679 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 USP13Q92995 863 aaPredicted RBP13.99□□□□□ -0.17
RAB5B-203ENST00000546810 CD101Q93033 1021 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 CACNA1EQ15878 2313 aa13.99□□□□□ -0.17
RAB5B-203ENST00000546810 C2orf78A6NCI8 922 aa13.98□□□□□ -0.17
RAB5B-203ENST00000546810 E5RJQ4 531 aa13.98□□□□□ -0.17
RAB5B-203ENST00000546810 PIK3R2O00459 728 aa13.98□□□□□ -0.17
RAB5B-203ENST00000546810 AP5Z1O43299 807 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms