RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
YBX3-217ENST00000546164 SLC8A2Q9UPR5 921 aa12.36□□□□□ -0.43
YBX3-217ENST00000546164 KIAA1549LQ6ZVL6 1849 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 A0A1B0GTH6 734 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 A0A1W2PQC6 194 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 TRIM24O15164 1050 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 IRAK2O43187 625 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 TEX33O43247 280 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 ACSL4O60488 711 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 GFPT2O94808 682 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 TRUB2O95900 331 aaKnown RBP12.35□□□□□ -0.43
YBX3-217ENST00000546164 CYP1A1P04798 512 aaPredicted RBP12.35□□□□□ -0.43
YBX3-217ENST00000546164 MMEP08473 750 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 SLC11A2P49281 568 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 FNTBP49356 437 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 DGKGP49619 791 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 NOMO3P69849 1222 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 SLC6A3Q01959 620 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 DMWDQ09019 674 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 FILIP1LQ4L180 1135 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 C2orf27AQ580R0 203 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 C10orf76Q5T2E6 689 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 MPP7Q5T2T1 576 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 TRIM72Q6ZMU5 477 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 WDR5BQ86VZ2 330 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 IL17RCQ8NAC3 791 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 SUMF1Q8NBK3 374 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
YBX3-217ENST00000546164 SYNCQ9H7C4 482 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 CBX8Q9HC52 389 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 MYO6Q9UM54 1294 aa12.35□□□□□ -0.43
YBX3-217ENST00000546164 ATG2BQ96BY7 2078 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 CFAP54Q96N23 3096 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 PRRT4C9JH25 899 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 DAB1O75553 588 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 APBB3O95704 486 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 CHRNB2P17787 502 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
YBX3-217ENST00000546164 NOS2P35228 1153 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 SEC13P55735 322 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 CDK17Q00537 523 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 FMO1Q01740 532 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 CRY1Q16526 586 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 DCAF6Q58WW2 860 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
YBX3-217ENST00000546164 EOGTQ5NDL2 527 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 EMC10Q5UCC4 262 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 OR6B2Q6IFH4 312 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 ARCQ7LC44 396 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 TRMT11Q7Z4G4 463 aaKnown RBP12.34□□□□□ -0.43
YBX3-217ENST00000546164 ERICH1Q86X53 443 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 DEFB106AQ8N104 65 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
YBX3-217ENST00000546164 MSANTD4Q8NCY6 345 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 ADAM32Q8TC27 787 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 DDI1Q8WTU0 396 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 SLC20A1Q8WUM9 679 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 BHMTQ93088 406 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 C18orf8Q96DM3 657 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 TMA16Q96EY4 203 aaKnown RBP12.34□□□□□ -0.43
YBX3-217ENST00000546164 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
YBX3-217ENST00000546164 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
YBX3-217ENST00000546164 RRN3Q9NYV6 651 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 PLK2Q9NYY3 685 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 HCN2Q9UL51 889 aa12.34□□□□□ -0.43
YBX3-217ENST00000546164 SGK1O00141 431 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 HRO43593 1189 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 ADAM23O75077 832 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 KLF8O95600 359 aaPredicted RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 APOEP02649 317 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 SLC2A3P11169 496 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 HNRNPLP14866 589 aaKnown RBP eCLIP12.33□□□□□ -0.44
YBX3-217ENST00000546164 MMP8P22894 467 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 HOXC13P31276 330 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 TIE1P35590 1138 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 DGKEP52429 567 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 TPM4P67936 248 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 PITX1P78337 314 aaPredicted RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 MTA1Q13330 715 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 NR1I3Q14994 352 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 EIF4HQ15056 248 aaKnown RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 PIK3R6Q5UE93 754 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 HEATR6Q6AI08 1181 aaKnown RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 NADSYN1Q6IA69 706 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 RASSF3Q86WH2 238 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 XYLT1Q86Y38 959 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 ZNF513Q8N8E2 541 aaPredicted RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 ZNF557Q8N988 423 aaPredicted RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 TSTD1Q8NFU3 115 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
YBX3-217ENST00000546164 NAP1L5Q96NT1 182 aaPredicted RBP12.33□□□□□ -0.44
YBX3-217ENST00000546164 HHIPQ96QV1 700 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms