RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GAB4Q2WGN9 574 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 DCUN1D2Q6PH85 259 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 RALGPS2Q86X27 583 aaPredicted RBP21.27■■□□□ 1
HMGA2-211ENST00000545998 CPXM2Q8N436 756 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 CENPIQ92674 756 aaPredicted RBP21.27■■□□□ 1
HMGA2-211ENST00000545998 SHDQ96IW2 340 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 SCINQ9Y6U3 715 aa21.27■■□□□ 1
HMGA2-211ENST00000545998 ACSL4O60488 711 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 APOEP02649 317 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 SLC2A3P11169 496 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 ADH5P11766 374 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 ZNF143P52747 638 aaPredicted RBP21.27■□□□□ 0.99
HMGA2-211ENST00000545998 VCPP55072 806 aaKnown RBP21.27■□□□□ 0.99
HMGA2-211ENST00000545998 ATP11AP98196 1134 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 FAM133BQ5BKY9 247 aaKnown RBP21.27■□□□□ 0.99
HMGA2-211ENST00000545998 ADGRF1Q5T601 910 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 RNF34Q969K3 372 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 BTN2A3PQ96KV6 586 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 MYO1AQ9UBC5 1043 aa21.27■□□□□ 0.99
HMGA2-211ENST00000545998 TMEM191CA6NGB0 347 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 GFRA2O00451 464 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 MAN2B1O00754 1011 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 HOXC11O43248 304 aaPredicted RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 MOCS2O96007 188 aaPredicted RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 PDGFBP01127 241 aaPredicted RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 CYP1A2P05177 515 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 RDXP35241 583 aaKnown RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 ATXN1P54253 815 aaKnown RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 SH3PXD2AQ5TCZ1 1133 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 NADSYN1Q6IA69 706 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 TXNDC11Q6PKC3 985 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 STRADAQ7RTN6 431 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 CCDC170Q8IYT3 715 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 ARHGEF26Q96DR7 871 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 P2RY11Q96G91 374 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 PACSIN1Q9BY11 444 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 MRPL47Q9HD33 250 aaKnown RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 C11orf16Q9NQ32 467 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 MARK1Q9P0L2 795 aa21.26■□□□□ 0.99
HMGA2-211ENST00000545998 XPO7Q9UIA9 1087 aaKnown RBP21.26■□□□□ 0.99
HMGA2-211ENST00000545998 GOLGA6L6A8MZA4 724 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 CD72P21854 359 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 AMPD2Q01433 879 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 OGDHQ02218 1023 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 GAD2Q05329 585 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 CDO1Q16878 200 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 RAB6CQ53S08 254 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 BRMS1LQ5PSV4 323 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 C1orf228Q6PIY5 440 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 ZNF852Q6ZMS4 543 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 TPGS1Q6ZTW0 290 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 SND1Q7KZF4 910 aaKnown RBP eCLIP21.25■□□□□ 0.99
HMGA2-211ENST00000545998 TMTC1Q8IUR5 882 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 ATP6V0D2Q8N8Y2 350 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 FAM172AQ8WUF8 416 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 CNPY3Q9BT09 278 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 TRIM7Q9C029 511 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 RAB6CQ9H0N0 254 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 WDCPQ9H6R7 721 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 TBC1D17Q9HA65 648 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 ARHGEF38Q9NXL2 777 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 SLC12A6Q9UHW9 1150 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 KIAA1549LQ6ZVL6 1849 aa21.25■□□□□ 0.99
HMGA2-211ENST00000545998 GOLGA6L7A0A1B0GV03 622 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 KANSL1LA0AUZ9 987 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 CCP110O43303 1012 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 LCA5LO95447 670 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 SLC6A4P31645 630 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 MRE11P49959 708 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 ANO4Q32M45 955 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 TMEM139Q8IV31 216 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 FAM3CQ92520 227 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 ANLNQ9NQW6 1124 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 PAXBP1Q9Y5B6 917 aa21.24■□□□□ 0.99
HMGA2-211ENST00000545998 SOWAHDA6NJG2 315 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 NEDD8-MDP1E9PL57 170 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 I6L893 689 aaPredicted RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 TRDMT1O14717 391 aaKnown RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 H2AFZP0C0S5 128 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 HDAC4P56524 1084 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 MTA1Q13330 715 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 FYB2Q5VWT5 728 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 NAIF1Q69YI7 327 aaPredicted RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 H2AFVQ71UI9 128 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 BMP8AQ7Z5Y6 402 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 ZNF687Q8N1G0 1237 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 FNIP1Q8TF40 1166 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 BAG1Q99933 345 aaPredicted RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 DDX50Q9BQ39 737 aaKnown RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 BBS2Q9BXC9 721 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 TKTL2Q9H0I9 626 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 MFSD1Q9H3U5 465 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 FAM86C2PA6NEL3 165 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 GPR37L1O60883 481 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 PENKP01210 267 aaPredicted RBP21.23■□□□□ 0.99
HMGA2-211ENST00000545998 TMEM253P0C7T8 217 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 TYRP14679 529 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 OPRD1P41143 372 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 GSDMDP57764 484 aa21.23■□□□□ 0.99
HMGA2-211ENST00000545998 ZNF252P-AS1Q0IIN9 211 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms