RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ENTPD5O75356 428 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 MAFO75444 373 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 GCATO75600 419 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 UPP2O95045 317 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SLURP2P0DP57 97 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 MYL2P10916 166 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 VDRP11473 427 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 BMP2P12643 396 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 DNAJB1P25685 340 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SERPINB3P29508 390 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ADSLP30566 484 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SSTR1P30872 391 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 GJC1P36383 396 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 FDFT1P37268 417 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 MAGEA3P43357 314 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PHKA2P46019 1235 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CDK7P50613 346 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PRKAA2P54646 552 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PSMC1P62191 440 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 RACK1P63244 317 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 DSG1Q02413 1049 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PPARDQ03181 441 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ITGA9Q13797 1035 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 BAATQ14032 418 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 STXBP2Q15833 593 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF699Q32M78 642 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 KHDC1Q4VXA5 237 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PLEKHG4Q58EX7 1191 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ACSBG2Q5FVE4 666 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 FNBP1LQ5T0N5 605 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 METTL21CQ5VZV1 264 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 TRIM68Q6AZZ1 485 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 OR52E8Q6IFG1 317 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 DARS2Q6PI48 645 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 TSHZ1Q6ZSZ6 1077 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SEPT14Q6ZU15 432 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ACAD11Q709F0 780 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 KRT27Q7Z3Y8 459 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 LCA5Q86VQ0 697 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 NCAPG2Q86XI2 1143 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 RFX6Q8HWS3 928 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PSTKQ8IV42 348 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PASD1Q8IV76 773 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CCDC60Q8IWA6 550 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SCYL3Q8IZE3 742 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ST13P4Q8IZP2 240 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 NME8Q8N427 588 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 GLIS1Q8NBF1 620 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 STKLD1Q8NE28 680 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CATSPER1Q8NEC5 780 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 REPS2Q8NFH8 660 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 GSDMBQ8TAX9 411 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SPATA18Q8TC71 538 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 NCSTNQ92542 709 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CDKL2Q92772 493 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PTPRN2Q92932 1015 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PWWP2AQ96N64 755 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 GBP5Q96PP8 586 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF670Q9BS34 389 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 TEX13BQ9BXU2 312 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 NFKBIZQ9BYH8 718 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ASCC2Q9H1I8 757 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 KIF9Q9HAQ2 790 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CAPN10Q9HC96 672 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 DMAP1Q9NPF5 467 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 EIF2B3Q9NR50 452 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CUEDC1Q9NWM3 386 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 NDE1Q9NXR1 346 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 RCOR3Q9P2K3 495 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PRKAG2Q9UGJ0 569 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CPSF3Q9UKF6 684 aaKnown RBP6.69□□□□□ -1.34
SNHG1-225ENST00000545920 USP18Q9UMW8 372 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SOX13Q9UN79 622 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 COMMD3-BMI1R4GMX3 469 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF541Q9H0D2 1346 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 GOLGA8QA0A0J9YX86 632 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 GOLGA8OA6NCC3 632 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FAM159BA6NKW6 160 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 B2RBV5 119 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TRIM49D1C9J1S8 452 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 GOLGA8NF8WBI6 632 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 APOL1O14791 398 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 AP1G1O43747 822 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PRPSAP2O60256 369 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 GLRA3O75311 464 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TBX10O75333 385 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM63AO94886 807 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 EGFRP00533 1210 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 APOEP02649 317 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 BPGMP07738 259 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ZSCAN5DPP0CG00 497 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FGFR1P11362 822 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ANPEPP15144 967 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ALOX15P16050 662 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 GPD1P21695 349 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 IBSPP21815 317 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 KCNA3P22001 575 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PROZP22891 400 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms