RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MARCH2Q9P0N8 246 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 UXTQ9UBK9 157 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 UTP11Q9Y3A2 253 aaKnown RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 ASB3Q9Y575 518 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 CREB3O43889 395 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 ECEL1O95672 775 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 GLUD1P00367 558 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 ZFXP17010 805 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 ZNF135P52742 658 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 TBX4P57082 545 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 NKD2Q969F2 451 aaPredicted RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 HAPLN3Q96S86 360 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 TRIM51Q9BSJ1 452 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 RAB17Q9H0T7 212 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 OSBPL2Q9H1P3 480 aa31.53■■■□□ 2.64
CCM2-219ENST00000544363 DRG1Q9Y295 367 aaKnown RBP31.53■■■□□ 2.64
CCM2-219ENST00000544363 FAM72CH0Y354 149 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 EEF2KO00418 725 aaKnown RBP31.52■■■□□ 2.64
CCM2-219ENST00000544363 SLC2A3P11169 496 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 PECAM1P16284 738 aaPredicted RBP31.52■■■□□ 2.64
CCM2-219ENST00000544363 PPP3CCP48454 512 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 VCPP55072 806 aaKnown RBP31.52■■■□□ 2.64
CCM2-219ENST00000544363 TRIP4Q15650 581 aaPredicted RBP31.52■■■□□ 2.64
CCM2-219ENST00000544363 FAM72AQ5TYM5 149 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 FAM72DQ6L9T8 149 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 TADA2BQ86TJ2 420 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 FAM72BQ86X60 149 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 P3H4Q92791 437 aa31.52■■■□□ 2.64
CCM2-219ENST00000544363 CCDC151A5D8V7 595 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 KCNU1A8MYU2 1149 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 AMPD1P23109 780 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 IRS1P35568 1242 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 PBX2P40425 430 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 HCAR3P49019 387 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 LMNB2Q03252 620 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 OASLQ15646 514 aaKnown RBP31.51■■■□□ 2.63
CCM2-219ENST00000544363 NPNTQ6UXI9 565 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 CCNI2Q6ZMN8 369 aaPredicted RBP31.51■■■□□ 2.63
CCM2-219ENST00000544363 FCRL2Q96LA5 508 aaPredicted RBP31.51■■■□□ 2.63
CCM2-219ENST00000544363 CCDC114Q96M63 670 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 ERP44Q9BS26 406 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 OR12D3Q9UGF7 316 aa31.51■■■□□ 2.63
CCM2-219ENST00000544363 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.5■■■□□ 2.63
CCM2-219ENST00000544363 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.5■■■□□ 2.63
CCM2-219ENST00000544363 H3BNC9 293 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 LRG1P02750 347 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 C8AP07357 584 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 TNFRSF8P28908 595 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 CLCN4P51793 760 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 GPM6BQ13491 265 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 SYDE1Q6ZW31 735 aaPredicted RBP31.5■■■□□ 2.63
CCM2-219ENST00000544363 ARHGEF4Q9NR80 690 aa31.5■■■□□ 2.63
CCM2-219ENST00000544363 ESYT3A0FGR9 886 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 PAGE1O75459 146 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 NOMO1Q15155 1222 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 KCTD19Q17RG1 926 aaPredicted RBP31.49■■■□□ 2.63
CCM2-219ENST00000544363 HECTD3Q5T447 861 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 PDE12Q6L8Q7 609 aaKnown RBP31.49■■■□□ 2.63
CCM2-219ENST00000544363 C1orf228Q6PIY5 440 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 RFX8Q6ZV50 586 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 MIB1Q86YT6 1006 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 CASKIN2Q8WXE0 1202 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 SEC14L1Q92503 715 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 EPAS1Q99814 870 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 ZNF148Q9UQR1 794 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 GAS8O95995 478 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 C1RP00736 705 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 ITGAVP06756 1048 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 ATP5C1P36542 298 aaKnown RBP31.49■■■□□ 2.63
CCM2-219ENST00000544363 TPI1P60174 286 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 DPYSQ14117 519 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 PPP1R7Q15435 360 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 DUPD1Q68J44 220 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 KLHDC10Q6PID8 442 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 PBX4Q9BYU1 374 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 DNMT3LQ9UJW3 386 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 SNX10Q9Y5X0 201 aa31.49■■■□□ 2.63
CCM2-219ENST00000544363 SLC12A8A0AV02 714 aa31.48■■■□□ 2.63
CCM2-219ENST00000544363 MCF2LO15068 1137 aa31.48■■■□□ 2.63
CCM2-219ENST00000544363 TUBP50607 506 aa31.48■■■□□ 2.63
CCM2-219ENST00000544363 KPNA1P52294 538 aaPredicted RBP31.48■■■□□ 2.63
CCM2-219ENST00000544363 EIF3EP60228 445 aaKnown RBP31.48■■■□□ 2.63
CCM2-219ENST00000544363 ZNF334Q9HCZ1 680 aaPredicted RBP31.48■■■□□ 2.63
CCM2-219ENST00000544363 DAPK3O43293 454 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 ERLIN1O75477 346 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 IGLV3-27P01718 113 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 CLCN6P51797 869 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 RING1Q06587 406 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 TRADDQ15628 312 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 NCBP2-AS2Q69YL0 99 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 TNS4Q8IZW8 715 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 SIK2Q9H0K1 926 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 ETNK2Q9NVF9 386 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 HBS1LQ9Y450 684 aaKnown RBP31.47■■■□□ 2.63
CCM2-219ENST00000544363 HEY1Q9Y5J3 304 aa31.47■■■□□ 2.63
CCM2-219ENST00000544363 APOEP02649 317 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 F11P03951 625 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 NR2C2P49116 596 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 CARSP49589 748 aaKnown RBP31.46■■■□□ 2.63
CCM2-219ENST00000544363 RTL10Q7L3V2 364 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms