RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 RHOBTB1O94844 696 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 HOXB2P14652 356 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 ELF2Q15723 593 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 PASD1Q8IV76 773 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 WDTC1Q8N5D0 677 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 TMEM35BQ8NCS4 154 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 CPXM1Q96SM3 734 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 SYNCQ9H7C4 482 aa24.2■■□□□ 1.46
CHFR-222ENST00000544093 BCCIPQ9P287 314 aaKnown RBP eCLIP24.2■■□□□ 1.46
CHFR-222ENST00000544093 TYW5A2RUC4 315 aaKnown RBP24.19■■□□□ 1.46
CHFR-222ENST00000544093 ANTXRLA6NF34 631 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 F8VZ95 297 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 TIMM44O43615 452 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 ACSL4O60488 711 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 CYP11B1P15538 503 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 LMNB2Q03252 620 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 TYRO3Q06418 890 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 EGFLAMQ63HQ2 1017 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 C1orf131Q8NDD1 294 aaKnown RBP24.19■■□□□ 1.46
CHFR-222ENST00000544093 PIWIL1Q96J94 861 aaKnown RBP24.19■■□□□ 1.46
CHFR-222ENST00000544093 SPACA7Q96KW9 195 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 GABRG3Q99928 467 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 LIMA1Q9UHB6 759 aaKnown RBP24.19■■□□□ 1.46
CHFR-222ENST00000544093 PCDHGA5Q9Y5G8 931 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 DMXL1Q9Y485 3027 aa24.19■■□□□ 1.46
CHFR-222ENST00000544093 TCRBV21S2A2A0A5A6 115 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 APOEP02649 317 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 CDK11BP21127 795 aaKnown RBP24.18■■□□□ 1.46
CHFR-222ENST00000544093 SDHBP21912 280 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 HOXD9P28356 352 aaPredicted RBP24.18■■□□□ 1.46
CHFR-222ENST00000544093 MTA1Q13330 715 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 SYPL2Q5VXT5 272 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 TAC4Q86UU9 113 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 KBTBD6Q86V97 674 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 WFIKKN2Q8TEU8 576 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 P2RY11Q96G91 374 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 SLC39A13Q96H72 371 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 FCRL2Q96LA5 508 aaPredicted RBP24.18■■□□□ 1.46
CHFR-222ENST00000544093 TMEM63CQ9P1W3 806 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 USP18Q9UMW8 372 aa24.18■■□□□ 1.46
CHFR-222ENST00000544093 LRRC10BA6NIK2 292 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 PRR5-ARHGAP8B1AHC4 643 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 LSM8O95777 96 aaKnown RBP24.17■■□□□ 1.46
CHFR-222ENST00000544093 PNMA6AP0CW24 399 aaPredicted RBP24.17■■□□□ 1.46
CHFR-222ENST00000544093 SLC2A3P11169 496 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 GBP1P32455 592 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 CDH5P33151 784 aaPredicted RBP24.17■■□□□ 1.46
CHFR-222ENST00000544093 COPB1P53618 953 aaKnown RBP24.17■■□□□ 1.46
CHFR-222ENST00000544093 ARHGAP8P85298 464 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 CDK17Q00537 523 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 PLK5Q496M5 336 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 PIK3R6Q5UE93 754 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 ZNF677Q86XU0 584 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 MSANTD4Q8NCY6 345 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 OLIG1Q8TAK6 271 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 HMGB4Q8WW32 186 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 SLC2A13Q96QE2 648 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 TPSD1Q9BZJ3 242 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 ZDHHC4Q9NPG8 344 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 TMEM51Q9NW97 253 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 HCN2Q9UL51 889 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 PLXND1Q9Y4D7 1925 aa24.17■■□□□ 1.46
CHFR-222ENST00000544093 LGALS16A8MUM7 142 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 EPN2O95208 641 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 TRUB2O95900 331 aaKnown RBP24.16■■□□□ 1.46
CHFR-222ENST00000544093 IGLV3-25P01717 112 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 ZNF18P17022 549 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 SPEM2Q0P670 501 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 CSRP2Q16527 193 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 GEN1Q17RS7 908 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 DCAF6Q58WW2 860 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 FAM133BQ5BKY9 247 aaKnown RBP24.16■■□□□ 1.46
CHFR-222ENST00000544093 SLC26A9Q7LBE3 791 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 PGBD3Q8N328 593 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 HJURPQ8NCD3 748 aaPredicted RBP24.16■■□□□ 1.46
CHFR-222ENST00000544093 ZNF397Q8NF99 534 aaPredicted RBP24.16■■□□□ 1.46
CHFR-222ENST00000544093 BPIFA3Q9BQP9 254 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 GANQ9H2C0 597 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.16■■□□□ 1.46
CHFR-222ENST00000544093 ELOVL2Q9NXB9 296 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 RRN3Q9NYV6 651 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 THAP10Q9P2Z0 257 aaPredicted RBP24.16■■□□□ 1.46
CHFR-222ENST00000544093 SLC12A6Q9UHW9 1150 aa24.16■■□□□ 1.46
CHFR-222ENST00000544093 TSPAN3O60637 253 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 TGM1P22735 817 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 SLC6A3Q01959 620 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 ARID5AQ03989 594 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 STARD3Q14849 445 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 PTPN20Q4JDL3 420 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 RNF43Q68DV7 783 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 OR6B2Q6IFH4 312 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 OLFML1Q6UWY5 402 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 CCDC117Q8IWD4 279 aaPredicted RBP24.15■■□□□ 1.46
CHFR-222ENST00000544093 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.15■■□□□ 1.46
CHFR-222ENST00000544093 ADAM32Q8TC27 787 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 BTN2A3PQ96KV6 586 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 SPAG5Q96R06 1193 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 DUSP15Q9H1R2 295 aaPredicted RBP24.15■■□□□ 1.46
CHFR-222ENST00000544093 FAM204AQ9H8W3 233 aa24.15■■□□□ 1.46
CHFR-222ENST00000544093 FAM207AQ9NSI2 230 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms