RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ACSL4O60488 711 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 PAPSS2O95340 614 aaPredicted RBP22.64■■□□□ 1.21
OTUB1-212ENST00000543988 APOEP02649 317 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 CYBBP04839 570 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 HOXC13P31276 330 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 SLC6A4P31645 630 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 NOS2P35228 1153 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 MATKP42679 507 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 NSFP46459 744 aaKnown RBP22.64■■□□□ 1.21
OTUB1-212ENST00000543988 RNASE9P60153 205 aaKnown RBP22.64■■□□□ 1.21
OTUB1-212ENST00000543988 EIF4EBP2Q13542 120 aaPredicted RBP22.64■■□□□ 1.21
OTUB1-212ENST00000543988 ZNF528Q3MIS6 628 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 C2orf27AQ580R0 203 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 RFWD3Q6PCD5 774 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 DDI1Q8WTU0 396 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 AZIN2Q96A70 460 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 FAM122AQ96E09 287 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 ADAM33Q9BZ11 813 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 EDEM3Q9BZQ6 932 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 XPO4Q9C0E2 1151 aaKnown RBP22.64■■□□□ 1.21
OTUB1-212ENST00000543988 COX16Q9P0S2 106 aa22.64■■□□□ 1.21
OTUB1-212ENST00000543988 XPO7Q9UIA9 1087 aaKnown RBP22.64■■□□□ 1.21
OTUB1-212ENST00000543988 TBC1D3BA6NDS4 549 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 K7ESF4 209 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 ATG13O75143 517 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 CISD3P0C7P0 127 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 TFE3P19532 575 aaPredicted RBP22.63■■□□□ 1.21
OTUB1-212ENST00000543988 HOXD9P28356 352 aaPredicted RBP22.63■■□□□ 1.21
OTUB1-212ENST00000543988 DGKGP49619 791 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 SGSHP51688 502 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 PTP4A2Q12974 167 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 MPPE1Q53F39 396 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 C10orf76Q5T2E6 689 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 SFMBT2Q5VUG0 894 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 TRNP1Q6NT89 227 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 PHLDB2Q86SQ0 1253 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 NELL1Q92832 810 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 NUCKS1Q9H1E3 243 aaKnown RBP22.63■■□□□ 1.21
OTUB1-212ENST00000543988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.63■■□□□ 1.21
OTUB1-212ENST00000543988 CALCOCO1Q9P1Z2 691 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 FBXO10Q9UK96 956 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 CLEC4EQ9ULY5 219 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 R4GN57 208 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 KIAA1549LQ6ZVL6 1849 aa22.63■■□□□ 1.21
OTUB1-212ENST00000543988 MYOFQ9NZM1 2061 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 FLT3P36888 993 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 NBL1P41271 181 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 TNFRSF4P43489 277 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 KIR2DL1P43626 348 aaPredicted RBP22.62■■□□□ 1.21
OTUB1-212ENST00000543988 NME3Q13232 169 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 PPP2R5DQ14738 602 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 PREPLQ4J6C6 727 aaPredicted RBP22.62■■□□□ 1.21
OTUB1-212ENST00000543988 EMC10Q5UCC4 262 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 PHF13Q86YI8 300 aaPredicted RBP22.62■■□□□ 1.21
OTUB1-212ENST00000543988 CCDC26Q8TAB7 109 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 ACDQ96AP0 544 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 MYEOVQ96EZ4 313 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 PRICKLE1Q96MT3 831 aaPredicted RBP22.62■■□□□ 1.21
OTUB1-212ENST00000543988 NPY6RQ99463 290 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 NUP58Q9BVL2 599 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 ZDHHC4Q9NPG8 344 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 METTL5Q9NRN9 209 aaKnown RBP22.62■■□□□ 1.21
OTUB1-212ENST00000543988 AIPL1Q9NZN9 384 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 TMEM59LQ9UK28 342 aa22.62■■□□□ 1.21
OTUB1-212ENST00000543988 A0A1W2PQJ5 194 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 M0QYT0 321 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 GBP1P32455 592 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 TIE1P35590 1138 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 PRKCIP41743 596 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 SULT1E1P49888 294 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 DMWDQ09019 674 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 PIK3R6Q5UE93 754 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 MON1BQ7L1V2 547 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 CCDC33Q8N5R6 958 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 ALLCQ8N6M5 410 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 NT5C3BQ969T7 300 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 TMA16Q96EY4 203 aaKnown RBP22.61■■□□□ 1.21
OTUB1-212ENST00000543988 BTN2A3PQ96KV6 586 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 RRN3Q9NYV6 651 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 ADAM22Q9P0K1 906 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 HCN2Q9UL51 889 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 STAP1Q9ULZ2 295 aa22.61■■□□□ 1.21
OTUB1-212ENST00000543988 KCNU1A8MYU2 1149 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 PRRT4C9JH25 899 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 GJB6O95452 261 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 KLF8O95600 359 aaPredicted RBP22.6■■□□□ 1.21
OTUB1-212ENST00000543988 TPM3P06753 285 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 SLC2A3P11169 496 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 CCR1P32246 355 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 MRPS21P82921 87 aaKnown RBP22.6■■□□□ 1.21
OTUB1-212ENST00000543988 DMC1Q14565 340 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 RNF43Q68DV7 783 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 SYT13Q7L8C5 426 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 ZNF571Q7Z3V5 609 aaPredicted RBP22.6■■□□□ 1.21
OTUB1-212ENST00000543988 EMC1Q8N766 993 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 IL17RCQ8NAC3 791 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 RNF34Q969K3 372 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 TBCBQ99426 244 aa22.6■■□□□ 1.21
OTUB1-212ENST00000543988 DDX50Q9BQ39 737 aaKnown RBP22.6■■□□□ 1.21
OTUB1-212ENST00000543988 HAUS4Q9H6D7 363 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms