RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 C12orf43Q96C57 262 aaKnown RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 DDX56Q9NY93 547 aaKnown RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 EXOC7Q9UPT5 735 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 TMA7Q9Y2S6 64 aaKnown RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 FADS3Q9Y5Q0 445 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 ITGB4P16144 1822 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 H6PDO95479 791 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 IL1R2P27930 398 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 ACOT2P49753 483 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 YWHAZP63104 245 aaKnown RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 DMPKQ09013 629 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 BNC2Q6ZN30 1099 aaPredicted RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 EMC1Q8N766 993 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 ZNF606Q8WXB4 792 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 PLEKHA8Q96JA3 519 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 EIF2AQ9BY44 585 aaKnown RBP13.04□□□□□ -0.32
SMG8-202ENST00000543872 TRPV6Q9H1D0 765 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
SMG8-202ENST00000543872 PMM2O15305 246 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 AMHP03971 560 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ATP5BP06576 529 aaKnown RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 CRHR1P34998 444 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 PPARGP37231 505 aaPredicted RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 DCDC5Q6ZRR9 648 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 DSELQ8IZU8 1212 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 KCTD17Q8N5Z5 321 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 NDEL1Q9GZM8 345 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ROBO1Q9Y6N7 1651 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 OSBPP22059 807 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 CDH3P22223 829 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 HMOX2P30519 316 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 L1CAMP32004 1257 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 SEPT6Q14141 434 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 FSCBQ5H9T9 825 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 EGFLAMQ63HQ2 1017 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 PPP1R2P3Q6NXS1 205 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 SDR16C5Q8N3Y7 309 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ATP6V0A1Q93050 837 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ATP6V1E2Q96A05 226 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 WDR55Q9H6Y2 383 aaPredicted RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 PLOD2O00469 737 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 KCNQ2O43526 872 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 ETFBP38117 255 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 NEK2P51955 445 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ROR1Q01973 937 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 SLC9B1Q4ZJI4 515 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 CASC4Q6P4E1 433 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
SMG8-202ENST00000543872 ARCQ7LC44 396 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 LZTR1Q8N653 840 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 KYQ8NBH2 561 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 KBTBD7Q8WVZ9 684 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 BIRC8Q96P09 236 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 COG4Q9H9E3 785 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 TRPC7Q9HCX4 862 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 KMT5AQ9NQR1 393 aa13.03□□□□□ -0.32
SMG8-202ENST00000543872 A0A1W2PPW3 197 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 HMX2A2RU54 273 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 SPAG6O75602 509 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 UGT1A6P19224 532 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 UGT1A1P22309 533 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 UGT1A4P22310 534 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 MMP8P22894 467 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 ARRB2P32121 409 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 UGT1A3P35503 534 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 UGT1A5P35504 534 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 HSPA13P48723 471 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 CUL2Q13617 745 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 BCL2A1Q16548 175 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 IL23RQ5VWK5 629 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 NXNQ6DKJ4 435 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 BBS12Q6ZW61 710 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 ZNF786Q8N393 782 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 TMC2Q8TDI7 906 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 PDCD6IPQ8WUM4 868 aaKnown RBP13.02□□□□□ -0.32
SMG8-202ENST00000543872 ISOC1Q96CN7 298 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 RCN3Q96D15 328 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 RANBP9Q96S59 729 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 NEURL2Q9BR09 285 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 KLC2Q9H0B6 622 aa13.02□□□□□ -0.32
SMG8-202ENST00000543872 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.32
SMG8-202ENST00000543872 KCNN4O15554 427 aa13.02□□□□□ -0.33
SMG8-202ENST00000543872 STAM2O75886 525 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms