RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ACTRT2Q8TDY3 377 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 PPP4R1Q8TF05 950 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 NLRP4Q96MN2 994 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 CENPKQ9BS16 269 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 PPP1R12CQ9BZL4 782 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 C20orf27Q9GZN8 174 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 UGT1A7Q9HAW7 530 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 UGT1A10Q9HAW8 530 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 UGT1A8Q9HAW9 530 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 GGA3Q9NZ52 723 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 MAD1L1Q9Y6D9 718 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 RALGAPA2Q2PPJ7 1873 aa14.16□□□□□ -0.14
VPS33A-208ENST00000543633 LACTBL1A8MY62 500 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 INO80B-WBP1J3KQ70 363 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 CAPN15O75808 1086 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 CYP3A5P20815 502 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 SLC1A6P48664 564 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 DEUP1Q05D60 604 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 TMEM132AQ24JP5 1023 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 MROH9Q5TGP6 573 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 JADE1Q6IE81 842 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 TRMT10BQ6PF06 316 aaKnown RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 PDSS2Q86YH6 399 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 RIOX2Q8IUF8 465 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 ST13P4Q8IZP2 240 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 PHC3Q8NDX5 983 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 MPHOSPH6Q99547 160 aaKnown RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 NT5C1AQ9BXI3 368 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 SLC4A5Q9BY07 1137 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 INO80BQ9C086 356 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 TSPAN16Q9UKR8 245 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 PPM1HQ9ULR3 514 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 DNAJC16Q9Y2G8 782 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 POLR2AP24928 1970 aaKnown RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 PEX1O43933 1283 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 UPP2O95045 317 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 PFKMP08237 780 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 C6orf222P0C671 652 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 KITP10721 976 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 ACAT1P24752 427 aaKnown RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 CYP2F1P24903 491 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 SLC6A3Q01959 620 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 ASPHQ12797 758 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 FSTL1Q12841 308 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 CDO1Q16878 200 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 MDH1BQ5I0G3 518 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 SYCP2LQ5T4T6 812 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 SDCCAG8Q86SQ7 713 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 LRRC71Q8N4P6 559 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 UBA3Q8TBC4 463 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 CMTM5Q96DZ9 223 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 HPDLQ96IR7 371 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 CLPTM1LQ96KA5 538 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 ZNF778Q96MU6 729 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 TTC1Q99614 292 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 GPR20Q99678 358 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 EBF4Q9BQW3 602 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 DMAP1Q9NPF5 467 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 MARCOQ9UEW3 520 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-208ENST00000543633 EMCNQ9ULC0 261 aa14.15□□□□□ -0.14
VPS33A-208ENST00000543633 KLHL33A6NCF5 533 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 CASQ2O14958 399 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 METTL18O95568 372 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 STAG3L1P0CL83 205 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PHKA2P46019 1235 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 HARS2P49590 506 aaKnown RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 NDST1P52848 882 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 ORC1Q13415 861 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 UBAP2LQ14157 1087 aaKnown RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PKDCCQ504Y2 493 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 N4BP2L1Q5TBK1 243 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PACS1Q6VY07 963 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 TMEM110Q86TL2 294 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 STON2Q8WXE9 905 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 ISL2Q96A47 359 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 BTBD9Q96Q07 612 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 ADARB2Q9NS39 739 aaKnown RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 ETAA1Q9NY74 926 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 RCOR3Q9P2K3 495 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-208ENST00000543633 ADAM28Q9UKQ2 775 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PTPRFP10586 1907 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 GPR25O00155 361 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 B4GALT5O43286 388 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 HBP1O60381 514 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 SIN3BO75182 1162 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 BAG2O95816 211 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PROCP04070 461 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PGAM1P18669 254 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 OSTNP61366 133 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 RBP5P82980 135 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 GRM2Q14416 872 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 TMEM132DQ14C87 1099 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PCLAFQ15004 111 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 GOLGA7BQ2TAP0 167 aa14.14□□□□□ -0.15
VPS33A-208ENST00000543633 PRAMEF18Q5VWM3 479 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms