RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TMEM51Q9NW97 253 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 GTSE1Q9NYZ3 720 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 ANAPC7Q9UJX3 599 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 AGO1Q9UL18 857 aaKnown RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 PCDHA13Q9Y5I0 950 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 EPN1Q9Y6I3 576 aaPredicted RBP6.56□□□□□ -1.36
LTBR-212ENST00000543542 PIAS3Q9Y6X2 628 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 MYO10Q9HD67 2058 aa6.56□□□□□ -1.36
LTBR-212ENST00000543542 GOLGA6L7A0A1B0GV03 622 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 TMEM191CA6NGB0 347 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 KCNU1A8MYU2 1149 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 F5H5T6 163 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 MYO1FO00160 1098 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 MAN2B1O00754 1011 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 TBL1XO60907 577 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 LATS1O95835 1130 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 IGLV3-25P01717 112 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 KLKB1P03952 638 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 CYP1A2P05177 515 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ADH5P11766 374 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 TFE3P19532 575 aaPredicted RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 PTPN9P43378 593 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 SOX9P48436 509 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ZNF143P52747 638 aaPredicted RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 PRKCQQ04759 706 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 SIGLEC14Q08ET2 396 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 MTA1Q13330 715 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 MESDQ14696 234 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 PPP2R5DQ14738 602 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 UBXN2BQ14CS0 331 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 DHCR24Q15392 516 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ASTE1Q2TB18 679 aaPredicted RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 CCDC14Q49A88 953 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 PREPLQ4J6C6 727 aaPredicted RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 MPPE1Q53F39 396 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ODF2Q5BJF6 829 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 BRMS1LQ5PSV4 323 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 RABGAP1LQ5R372 815 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 LY6G5CQ5SRR4 150 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 PPP1R15BQ5SWA1 713 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ADGRF1Q5T601 910 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 SH3PXD2AQ5TCZ1 1133 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 RFWD3Q6PCD5 774 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 LRRC31Q6UY01 552 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ZNF852Q6ZMS4 543 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 NUDT18Q6ZVK8 323 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 STRADAQ7RTN6 431 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 TMEM25Q86YD3 366 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 RHOT2Q8IXI1 618 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ADGRG2Q8IZP9 1017 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 LGI2Q8N0V4 545 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 KIAA1958Q8N8K9 716 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 NAT16Q8N8M0 369 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 FLCNQ8NFG4 579 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 OLIG1Q8TAK6 271 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 FAM3CQ92520 227 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ARHGEF26Q96DR7 871 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 TMA16Q96EY4 203 aaKnown RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 ASIC4Q96FT7 647 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 MSANTD3Q96H12 275 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 NCAPGQ9BPX3 1015 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 CNPY3Q9BT09 278 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 C8orf33Q9H7E9 229 aaPredicted RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 HPS4Q9NQG7 708 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 ARHGEF3Q9NR81 526 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 PLK2Q9NYY3 685 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 STIM2Q9P246 746 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 UVRAGQ9P2Y5 699 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 WNT16Q9UBV4 365 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 PCSK1NQ9UHG2 260 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 IP6K2Q9UHH9 426 aa6.55□□□□□ -1.36
LTBR-212ENST00000543542 NDRG2Q9UN36 371 aaKnown RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 MRPS17Q9Y2R5 130 aaKnown RBP6.55□□□□□ -1.36
LTBR-212ENST00000543542 MIA3Q5JRA6 1907 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 TCRBV5S1A1TA0A578 114 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 TMEM221A6NGB7 291 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.54□□□□□ -1.36
LTBR-212ENST00000543542 SPECC1L-ADORA2AF8WAN1 911 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 H0Y626 953 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 M0R296 226 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 NCAM2O15394 837 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 ARHGAP6O43182 974 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 PRPSAP2O60256 369 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 SRGAP2O75044 1071 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 PAGE1O75459 146 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 IGLV3-27P01718 113 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 CYP17A1P05093 508 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 TYRP14679 529 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 GLULP15104 373 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 TACR2P21452 398 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 CD72P21854 359 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 GJA4P35212 333 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 GJC1P36383 396 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 GGCXP38435 758 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 CXCR3P49682 368 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 KDSRQ06136 332 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 KIF5AQ12840 1032 aa6.54□□□□□ -1.36
LTBR-212ENST00000543542 PIGHQ14442 188 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms