RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	MOCS1	Q9NZB8	636 aa		13.92	□□□□□ -0.18
PPME1-208	ENST00000543525	DTL	Q9NZJ0	730 aa		13.92	□□□□□ -0.18
PPME1-208	ENST00000543525	ENTPD5	O75356	428 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	AMPD1	P23109	780 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	ATXN1	P54253	815 aa	Known RBP	13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	OCRL	Q01968	901 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	STX3	Q13277	289 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	NAB1	Q13506	487 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.91	□□□□□ -0.18	3e-13	■■■■■ 69.4
PPME1-208	ENST00000543525	TSNAXIP1	Q2TAA8	658 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	TEX44	Q53QW1	395 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	MROH9	Q5TGP6	573 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	RFWD3	Q6PCD5	774 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	KYAT3	Q6YP21	454 aa	Known RBP	13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	MARK2	Q7KZI7	788 aa	Known RBP	13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	CCNJL	Q8IV13	435 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	PSTK	Q8IV42	348 aa	Known RBP	13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	CCDC185	Q8N715	623 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	STKLD1	Q8NE28	680 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	ACMSD	Q8TDX5	336 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	CDKL2	Q92772	493 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	ZNF560	Q96MR9	790 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	LPIN3	Q9BQK8	851 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	EIF2A	Q9BY44	585 aa	Known RBP	13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	CXCL16	Q9H2A7	254 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	EIF2B3	Q9NR50	452 aa	Known RBP	13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	STOML1	Q9UBI4	398 aa		13.91	□□□□□ -0.18
PPME1-208	ENST00000543525	CCDC195	A0A1B0GUA6	201 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	C2orf71	A6NGG8	1288 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	SDR42E2	A6NKP2	422 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525		H0Y3Z8	333 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	XPOT	O43592	962 aa	Known RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	KIF1C	O43896	1103 aa	Known RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	ALDH1A2	O94788	518 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	MMP3	P08254	477 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	PDGFRB	P09619	1106 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	RARB	P10826	455 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	TBCC	Q15814	346 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	CCDC6	Q16204	474 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	DGKD	Q16760	1214 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	FBXO47	Q5MNV8	452 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	LRRC8B	Q6P9F7	803 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	ALKAL1	Q6UXT8	129 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	DENND5B	Q6ZUT9	1274 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	OR6J1	Q8NGC5	347 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	PPP1R14C	Q8TAE6	165 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	PRR11	Q96HE9	360 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	OLFM3	Q96PB7	478 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	TRIM6	Q9C030	488 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	NMUR2	Q9GZQ4	415 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	KATNBL1	Q9H079	304 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	FZD10	Q9ULW2	581 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	WDR27	A2RRH5	827 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	HMX2	A2RU54	273 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525		H3BRJ5	948 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	STRN	O43815	780 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	SNN	O75324	88 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	HOXD8	P13378	290 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	GOT1	P17174	413 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	GCK	P35557	465 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	PNPLA4	P41247	253 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	MATK	P42679	507 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	SULT1E1	P49888	294 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	WASHC5	Q12768	1159 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	GLRA4	Q5JXX5	417 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	CASC4	Q6P4E1	433 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	TTC7B	Q86TV6	843 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	ALYREF	Q86V81	257 aa	Known RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	COLGALT1	Q8NBJ5	622 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	TSPAN18	Q96SJ8	248 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	SIKE1	Q9BRV8	207 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	THAP1	Q9NVV9	213 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	TAS2R1	Q9NYW7	299 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	GINS2	Q9Y248	185 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	USP3	Q9Y6I4	520 aa		13.9	□□□□□ -0.18
PPME1-208	ENST00000543525	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	KPNA7	A9QM74	516 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	PIR	O00625	290 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	CYB561D2	O14569	222 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	OPHN1	O60890	802 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	ZNF189	O75820	626 aa	Predicted RBP	13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	RECQL4	O94761	1208 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	SNAI1	O95863	264 aa	Predicted RBP	13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	VAV1	P15498	845 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	PGM1	P36871	562 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	GRIA1	P42261	906 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	PTDSS1	P48651	473 aa	Known RBP	13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	AQP5	P55064	265 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	ZRSR2	Q15696	482 aa	Known RBP	13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	SLC25A52	Q3SY17	297 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	DUSP28	Q4G0W2	176 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	KHDC1	Q4VXA5	237 aa	Known RBP	13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	DSTYK	Q6XUX3	929 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	TMPRSS6	Q8IU80	811 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	LMNTD2	Q8IXW0	634 aa		13.89	□□□□□ -0.19
PPME1-208	ENST00000543525	CCDC33	Q8N5R6	958 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms