RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PSEN1P49768 467 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 THOP1P52888 689 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 POLR2LP62875 67 aaKnown RBP7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC6A3Q01959 620 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 LRRC74AQ0VAA2 488 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 BEND6Q5SZJ8 279 aaPredicted RBP7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC24A5Q71RS6 500 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 LRRC8DQ7L1W4 858 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 DDX42Q86XP3 938 aaKnown RBP eCLIP7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 TAGAPQ8N103 731 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 C4orf33Q8N1A6 199 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM161BQ8NDZ6 487 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 LENG9Q96B70 501 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 VCPIP1Q96JH7 1222 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 VPS45Q9NRW7 570 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 RIC8BQ9NVN3 520 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 SPASTQ9UBP0 616 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 ANGPTL2Q9UKU9 493 aa7.09□□□□□ -1.28
SRGAP1-206ENST00000543397 E2F8A0AVK6 867 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 MOXD2PA6NHM9 499 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 NT5C1B-RDH14C9J2C7 533 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 FZD9O00144 591 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 TRIM16O95361 564 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 AGTP01019 485 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 NPR3P17342 541 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 GTF2BQ00403 316 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 CRHR2Q13324 411 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 TUSC3Q13454 348 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 MROH9Q5TGP6 573 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 HIBCHQ6NVY1 386 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 FBXL19Q6PCT2 694 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SPOCD1Q6ZMY3 1216 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 LRRC6Q86X45 466 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 APBB2Q92870 758 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 PPP1R36Q96LQ0 422 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 GPR20Q99678 358 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ACO2Q99798 780 aaKnown RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 WDR41Q9HAD4 459 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 VANGL2Q9ULK5 521 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 A0A0G2JLL6 359 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 RAD51CO43502 376 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ERVK-10P10266 1014 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ALOX15P16050 662 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ESRRGP62508 458 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SNCBQ16143 134 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 PLPP4Q5VZY2 271 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 PRRT2Q7Z6L0 340 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 MCOLN2Q8IZK6 566 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 PDLIM2Q96JY6 352 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 DNMT3LQ9UJW3 386 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 MYO5BQ9ULV0 1848 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 TISP43B9A030 160 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 E5RJQ4 531 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 DYRK3O43781 588 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ATP5HO75947 161 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 GJB1P08034 283 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 RPSAP08865 295 aaKnown RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 OCM2P0CE71 109 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 OCMP0CE72 109 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 GLUD2P49448 558 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF135P52742 658 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 BCL2L1Q07817 233 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF571Q7Z3V5 609 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 NT5DC3Q86UY8 548 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ST13P5Q8NFI4 369 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 PPP1R16AQ96I34 528 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 CCDC3Q9BQI4 270 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 FAM167BQ9BTA0 163 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 MRPL46Q9H2W6 279 aaKnown RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ACTR5Q9H9F9 607 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SMARCAL1Q9NZC9 954 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 AKAP7Q9P0M2 348 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 KIF17Q9P2E2 1029 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 UBA2Q9UBT2 640 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 GLP2RO95838 553 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 OR1D2P34982 312 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SHROOM1Q2M3G4 852 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SERPINA13PQ6UXR4 307 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 PRUNE1Q86TP1 453 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 IFNL1Q8IU54 200 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ARHGEF19Q8IW93 802 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 B3GALNT2Q8NCR0 500 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ACTL9Q8TC94 416 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 ELMO3Q96BJ8 720 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 GRAMD1AQ96CP6 724 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 SGF29Q96ES7 293 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 OMDQ99983 421 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 TTPALQ9BTX7 342 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 MAF1Q9H063 256 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 TKTL2Q9H0I9 626 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 BTBD7Q9P203 1132 aa7.08□□□□□ -1.28
SRGAP1-206ENST00000543397 RNF103-CHMP3A0A140T963 221 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 OR6C75A6NL08 312 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 CYP2A6P11509 494 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 DARSP14868 501 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 YBX3P16989 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms