RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 STX18Q9P2W9 335 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TNFSF13BQ9Y275 285 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 RRN3P2A6NIE6 340 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PRR5-ARHGAP8B1AHC4 643 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 LIN7AO14910 233 aaPredicted RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 XPO1O14980 1071 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 NCAM2O15394 837 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 USP12O75317 370 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 DDHD2O94830 711 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 HNRNPCP07910 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 SERPINA6P08185 405 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ERVK-10P10266 1014 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 RAG1P15918 1043 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 KCNA2P16389 499 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PCSK1P29120 753 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 AVPR1AP37288 418 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ARHGAP8P85298 464 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PRKAA1Q13131 559 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PDAP1Q13442 181 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ANO4Q32M45 955 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 EEF1DP3Q658K8 133 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ULK2Q8IYT8 1036 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 ACMSDQ8TDX5 336 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 PABPC5Q96DU9 382 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 CDRT15Q96T59 188 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 CPNE1Q99829 537 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 DHX33Q9H6R0 707 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 TAS2R1Q9NYW7 299 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 AAR2Q9Y312 384 aaKnown RBP8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 LRP6O75581 1613 aa8.43□□□□□ -1.06
PRKAB1-207ENST00000542698 GLI3P10071 1580 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 A0A0A0MRY4 1105 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 HACD1B0YJ81 288 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 TPP1O14773 563 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SUPT7LO94864 414 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 PSMC3P17980 439 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 ENPEPQ07075 957 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 PTK2BQ14289 1009 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SPDYAQ5MJ70 313 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 AGAP9Q5VTM2 703 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 FAM183BPQ6ZVS7 135 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 LRRN4Q8WUT4 740 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SPATA13Q96N96 652 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 ZBTB18Q99592 522 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 NMRAL1Q9HBL8 299 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 IRAK4Q9NWZ3 460 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SNX13Q9Y5W8 968 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 PLSCR1O15162 318 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 BIRC5O15392 142 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 E2F6O75461 281 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 AP1G2O75843 785 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 MPOP05164 745 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 C6orf222P0C671 652 aaPredicted RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 TPH1P17752 444 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SLC18A1P54219 525 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 JAG1P78504 1218 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 WASHC5Q12768 1159 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 MPP2Q14168 576 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 DGKDQ16760 1214 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 GSTA3Q16772 222 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 OLFML2BQ68BL8 750 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 NT5DC4Q86YG4 428 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 DEFB106AQ8N104 65 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 RBM15BQ8NDT2 890 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 ZNF526Q8TF50 670 aaPredicted RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 AFG1LQ8WV93 481 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 TFAP2BQ92481 460 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 GCNAQ96QF7 691 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SPON2Q9BUD6 331 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 CADM1Q9BY67 442 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 MTFR1LQ9H019 292 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 IL1RL2Q9HB29 575 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SNTG2Q9NY99 539 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 NUP98P52948 1817 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 ABLIM1O14639 778 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 STRNO43815 780 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 TPST1O60507 370 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 FAM155BO75949 473 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 BPGMP07738 259 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 CD48P09326 243 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 HADHAP40939 763 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 ABCE1P61221 599 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 KRT72Q14CN4 511 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 R3HDM1Q15032 1099 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 C16orf87Q6PH81 154 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SNX32Q86XE0 403 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 MFN1Q8IWA4 741 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 NUP93Q8N1F7 819 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 C12orf29Q8N999 325 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 GLIS1Q8NBF1 620 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 PDCD6IPQ8WUM4 868 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 USP13Q92995 863 aaPredicted RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 WNK4Q96J92 1243 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 PPP1R2P1Q96PQ5 205 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 FIZ1Q96SL8 496 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms