RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 LRRC57Q8N9N7 239 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 ADAMTS19Q8TE59 1207 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 NTAN1Q96AB6 310 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 RAB6CQ9H0N0 254 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 PCSK1NQ9UHG2 260 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 CAPN6Q9Y6Q1 641 aa23.99■■□□□ 1.43
HOMER3-205ENST00000542541 LATS1O95835 1130 aa23.98■■□□□ 1.43
HOMER3-205ENST00000542541 MSNP26038 577 aaKnown RBP23.98■■□□□ 1.43
HOMER3-205ENST00000542541 CORO1AP31146 461 aaKnown RBP23.98■■□□□ 1.43
HOMER3-205ENST00000542541 VIPR2P41587 438 aa23.98■■□□□ 1.43
HOMER3-205ENST00000542541 BPIFB1Q8TDL5 484 aa23.98■■□□□ 1.43
HOMER3-205ENST00000542541 ELSPBP1Q96BH3 223 aa23.98■■□□□ 1.43
HOMER3-205ENST00000542541 RPGRIP1Q96KN7 1286 aa23.98■■□□□ 1.43
HOMER3-205ENST00000542541 TBC1D14Q9P2M4 693 aa23.98■■□□□ 1.43
HOMER3-205ENST00000542541 KRT7P08729 469 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 SP100P23497 879 aaPredicted RBP23.97■■□□□ 1.43
HOMER3-205ENST00000542541 USP4Q13107 963 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 ZNF77Q15935 545 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 PEX26Q7Z412 305 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 PSTKQ8IV42 348 aaKnown RBP23.97■■□□□ 1.43
HOMER3-205ENST00000542541 DENND1CQ8IV53 801 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 ZDHHC14Q8IZN3 488 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 HAPLN3Q96S86 360 aa23.97■■□□□ 1.43
HOMER3-205ENST00000542541 DDX50Q9BQ39 737 aaKnown RBP23.97■■□□□ 1.43
HOMER3-205ENST00000542541 THG1LQ9NWX6 298 aaKnown RBP23.97■■□□□ 1.43
HOMER3-205ENST00000542541 HEPACAM2A8MVW5 462 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 C2CD4DB7Z1M9 353 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 SLC9A3R1O14745 358 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-205ENST00000542541 ECI2O75521 394 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 MOCS2O96007 188 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-205ENST00000542541 FCARP24071 287 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 ERMARDQ5T6L9 678 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 LRRC38Q5VT99 294 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 DAB2IPQ5VWQ8 1189 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 TANGO2Q6ICL3 276 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 RHOT1Q8IXI2 618 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 GOLPH3Q9H4A6 298 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 AMFRQ9UKV5 643 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.96■■□□□ 1.43
HOMER3-205ENST00000542541 DENND4AQ7Z401 1863 aa23.96■■□□□ 1.43
HOMER3-205ENST00000542541 KLKB1P03952 638 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 IL9P15248 144 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 SCAPQ12770 1279 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 EFHC2Q5JST6 749 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 POLNQ7Z5Q5 900 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 CCDC185Q8N715 623 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 ATXN2LQ8WWM7 1075 aaKnown RBP23.95■■□□□ 1.43
HOMER3-205ENST00000542541 NXPE3Q969Y0 559 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 PRKAG3Q9UGI9 489 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 AGO1Q9UL18 857 aaKnown RBP23.95■■□□□ 1.43
HOMER3-205ENST00000542541 HYOU1Q9Y4L1 999 aa23.95■■□□□ 1.43
HOMER3-205ENST00000542541 UNC80Q8N2C7 3258 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 ANHXE9PGG2 379 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 ACSL4O60488 711 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 GREM1O60565 184 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 PAGE1O75459 146 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 SLC25A11Q02978 314 aaKnown RBP23.95■■□□□ 1.42
HOMER3-205ENST00000542541 PARM1Q6UWI2 310 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 Q6ZNB5 142 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 MFSD6LQ8IWD5 586 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 YAF2Q8IY57 180 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 DEPDC1BQ8WUY9 529 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 TEKT4Q8WW24 435 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 WBP2Q969T9 261 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 OTUB2Q96DC9 234 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 C1orf74Q96LT6 269 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 IRX2Q9BZI1 471 aaPredicted RBP23.95■■□□□ 1.42
HOMER3-205ENST00000542541 ZWILCHQ9H900 591 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.95■■□□□ 1.42
HOMER3-205ENST00000542541 STOML2Q9UJZ1 356 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 FZD10Q9ULW2 581 aa23.95■■□□□ 1.42
HOMER3-205ENST00000542541 CHKAP35790 457 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 TAS2R40P59535 323 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 ADGRF1Q5T601 910 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 NT5DC3Q86UY8 548 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 CPNE8Q86YQ8 564 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 FGF14Q92915 247 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 RSPRY1Q96DX4 576 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 PEBP4Q96S96 227 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 OSBPL2Q9H1P3 480 aa23.94■■□□□ 1.42
HOMER3-205ENST00000542541 MIF4GDA9UHW6 222 aaKnown RBP23.93■■□□□ 1.42
HOMER3-205ENST00000542541 PSTPIP1O43586 416 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 TCF4P15884 667 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 PSMC3P17980 439 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 IL1R2P27930 398 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 MLLT6P55198 1093 aaPredicted RBP23.93■■□□□ 1.42
HOMER3-205ENST00000542541 HTR4Q13639 388 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 ZNF569Q5MCW4 686 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 LRRC3BQ96PB8 259 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 KXD1Q9BQD3 176 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 SNRNP25Q9BV90 132 aaKnown RBP23.93■■□□□ 1.42
HOMER3-205ENST00000542541 SIK2Q9H0K1 926 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 IGSF9Q9P2J2 1179 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 AP4E1Q9UPM8 1137 aa23.93■■□□□ 1.42
HOMER3-205ENST00000542541 CCDC66A2RUB6 948 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 FTCDO95954 541 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 RARAP10276 462 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 TNNT1P13805 278 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 ZFYVE27Q5T4F4 411 aa23.92■■□□□ 1.42
HOMER3-205ENST00000542541 VITQ6UXI7 678 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms