RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PPM1JQ5JR12 505 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 CXCL17Q6UXB2 119 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 XYLT1Q86Y38 959 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 SUGP1Q8IWZ8 645 aaKnown RBP16.56■□□□□ 0.24
VARS2-212ENST00000542001 MED21Q13503 144 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 TMTC4Q5T4D3 741 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 POTEAQ6S8J7 498 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 DCLRE1BQ9H816 532 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 ITGA11Q9UKX5 1188 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 MYO18AQ92614 2054 aaKnown RBP16.56■□□□□ 0.24
VARS2-212ENST00000542001 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
VARS2-212ENST00000542001 EDF1O60869 148 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 TOP3BO95985 862 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 SLC1A6P48664 564 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 IYDQ6PHW0 289 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 CTU1Q7Z7A3 348 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 PPHLN1Q8NEY8 458 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 NTPCRQ9BSD7 190 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 EIF2AQ9BY44 585 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 TM9SF1O15321 606 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 USP2O75604 605 aaPredicted RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 YBX3P16989 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
VARS2-212ENST00000542001 NAGLUP54802 743 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 SLC4A11Q8NBS3 891 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 SCG3Q8WXD2 468 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 NMUR2Q9GZQ4 415 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 MRPL46Q9H2W6 279 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 ST6GALNAC4Q9H4F1 302 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 PCDH18Q9HCL0 1135 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 NT5MQ9NPB1 228 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 RBM22Q9NW64 420 aaKnown RBP eCLIP16.55■□□□□ 0.248e-7■■■■■ 29.1
VARS2-212ENST00000542001 DRG1Q9Y295 367 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 SNX10Q9Y5X0 201 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 COL14A1Q05707 1796 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 NFASCO94856 1347 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 ZBBXA8MT70 800 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 PPEF2O14830 753 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 PGK1P00558 417 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 CALB2P22676 271 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 KPNA2P52292 529 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 EFEMP1Q12805 493 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 KYAT1Q16773 422 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 DNAL1Q4LDG9 190 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 MSS51Q4VC12 460 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 TAS1R3Q7RTX0 852 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 PLEKHH3Q7Z736 793 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 CRYGNQ8WXF5 182 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 RPRD1AQ96P16 312 aaPredicted RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 BTBD10Q9BSF8 475 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 UPF3AQ9H1J1 476 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 KIAA1257Q9ULG3 409 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
VARS2-212ENST00000542001 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 GLRA3O75311 464 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 RGS20O76081 388 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 THP07101 528 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 PIRTP0C851 137 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 SLC26A2P50443 739 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 RAB6CQ53S08 254 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 SGO1Q5FBB7 561 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 C10orf120Q5SQS8 335 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 CHSY1Q86X52 802 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 AZIN2Q96A70 460 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 RAB6CQ9H0N0 254 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 TMPRSS4Q9NRS4 437 aa16.55■□□□□ 0.24
VARS2-212ENST00000542001 PCSK1P29120 753 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 ATICP31939 592 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 SCNN1GP51170 649 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 VWA5B1Q5TIE3 1220 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 UNC5AQ6ZN44 842 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 EME1Q96AY2 570 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 ZNF512Q96ME7 567 aaPredicted RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 ILKAPQ9H0C8 392 aaPredicted RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 FAF1Q9UNN5 650 aaPredicted RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 MYH3P11055 1940 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 LMO2P25791 158 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 NDUFV1P49821 464 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 MGAT5Q09328 741 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 ACVR2BQ13705 512 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 DCAF4L1Q3SXM0 396 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 C6orf10Q5SRN2 563 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 RNASEH2BQ5TBB1 312 aaKnown RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 ZSCAN18Q8TBC5 510 aaPredicted RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 GPR152Q8TDT2 470 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 TKTL2Q9H0I9 626 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 LRRC40Q9H9A6 602 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 PPCSQ9HAB8 311 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 MAFBQ9Y5Q3 323 aaPredicted RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 C17orf102A2RUQ5 167 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 RRN3P2A6NIE6 340 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 E5RI56 91 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 XPO1O14980 1071 aaKnown RBP16.54■□□□□ 0.24
VARS2-212ENST00000542001 PTPN7P35236 360 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 SLC10A6Q3KNW5 377 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 GPC2Q8N158 579 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 PLD5Q8N7P1 536 aa16.54■□□□□ 0.24
VARS2-212ENST00000542001 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms