RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 AKAP13Q12802 2813 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 XPO1O14980 1071 aaKnown RBP25.08■■□□□ 1.61
LEMD3-203ENST00000541171 ACADMP11310 421 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 PRCPP42785 496 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 HARS2P49590 506 aaKnown RBP25.08■■□□□ 1.61
LEMD3-203ENST00000541171 LRMPQ12912 555 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 GRIK2Q13002 908 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 CUL2Q13617 745 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 TRIP4Q15650 581 aaPredicted RBP25.08■■□□□ 1.61
LEMD3-203ENST00000541171 DCAF12L1Q5VU92 463 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 TMEM215Q68D42 235 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 SERPINA13PQ6UXR4 307 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 BHLHA9Q7RTU4 235 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 ZCCHC14Q8WYQ9 949 aaKnown RBP25.08■■□□□ 1.61
LEMD3-203ENST00000541171 CCDC34Q96HJ3 373 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 IPO9Q96P70 1041 aaKnown RBP25.08■■□□□ 1.61
LEMD3-203ENST00000541171 SLC2A11Q9BYW1 496 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 ATP6V1DQ9Y5K8 247 aa25.08■■□□□ 1.61
LEMD3-203ENST00000541171 A0A1B0GTW7 788 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 H0Y626 953 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 TRIM16O95361 564 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 HLA-EP13747 358 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 OXTRP30559 389 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 COPAP53621 1224 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 BCAT1P54687 386 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 ADIGQ0VDE8 80 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 HNRNPDQ14103 355 aaKnown RBP25.07■■□□□ 1.6
LEMD3-203ENST00000541171 EIF4HQ15056 248 aaKnown RBP25.07■■□□□ 1.6
LEMD3-203ENST00000541171 E2F5Q15329 346 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 TRIP6Q15654 476 aaKnown RBP25.07■■□□□ 1.6
LEMD3-203ENST00000541171 MPPE1Q53F39 396 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 FAM124AQ86V42 546 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 FAM217AQ8IXS0 508 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 DNASE2BQ8WZ79 361 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 TSG101Q99816 390 aa25.07■■□□□ 1.6
LEMD3-203ENST00000541171 OLA1Q9NTK5 396 aaKnown RBP25.07■■□□□ 1.6
LEMD3-203ENST00000541171 GJB3O75712 270 aa25.06■■□□□ 1.6
LEMD3-203ENST00000541171 BST2Q10589 180 aaKnown RBP25.06■■□□□ 1.6
LEMD3-203ENST00000541171 SLC14A1Q13336 389 aa25.06■■□□□ 1.6
LEMD3-203ENST00000541171 BSPRYQ5W0U4 402 aa25.06■■□□□ 1.6
LEMD3-203ENST00000541171 SIX6OS1Q8N1H7 587 aa25.06■■□□□ 1.6
LEMD3-203ENST00000541171 RBBP8NLQ8NC74 664 aaPredicted RBP25.06■■□□□ 1.6
LEMD3-203ENST00000541171 CADM4Q8NFZ8 388 aa25.06■■□□□ 1.6
LEMD3-203ENST00000541171 RMND1Q9NWS8 449 aa25.06■■□□□ 1.6
LEMD3-203ENST00000541171 SRRM3A6NNA2 597 aaPredicted RBP25.05■■□□□ 1.6
LEMD3-203ENST00000541171 YJEFN3A6XGL0 299 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 E7ENQ6 273 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 TIMM44O43615 452 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 LCP1P13796 627 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 HOXD9P28356 352 aaPredicted RBP25.05■■□□□ 1.6
LEMD3-203ENST00000541171 YWHAEP62258 255 aaKnown RBP25.05■■□□□ 1.6
LEMD3-203ENST00000541171 ZNF423Q2M1K9 1284 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 ANKRD40Q6AI12 368 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 NAXDQ8IW45 347 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 CYB5D2Q8WUJ1 264 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 NUP58Q9BVL2 599 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 ZDHHC5Q9C0B5 715 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 COQ4Q9Y3A0 265 aa25.05■■□□□ 1.6
LEMD3-203ENST00000541171 HBS1LQ9Y450 684 aaKnown RBP25.05■■□□□ 1.6
LEMD3-203ENST00000541171 METTL12A8MUP2 240 aa25.04■■□□□ 1.6
LEMD3-203ENST00000541171 SLC16A3O15427 465 aaKnown RBP25.04■■□□□ 1.6
LEMD3-203ENST00000541171 MSI1O43347 362 aaKnown RBP25.04■■□□□ 1.6
LEMD3-203ENST00000541171 VDRP11473 427 aa25.04■■□□□ 1.6
LEMD3-203ENST00000541171 PMS1P54277 932 aaKnown RBP25.04■■□□□ 1.6
LEMD3-203ENST00000541171 FNDC3BQ53EP0 1204 aaKnown RBP25.04■■□□□ 1.6
LEMD3-203ENST00000541171 ZNF366Q8N895 744 aa25.04■■□□□ 1.6
LEMD3-203ENST00000541171 TMA16Q96EY4 203 aaKnown RBP25.04■■□□□ 1.6
LEMD3-203ENST00000541171 IL21RQ9HBE5 538 aa25.04■■□□□ 1.6
LEMD3-203ENST00000541171 EIF2B4Q9UI10 523 aaKnown RBP25.04■■□□□ 1.6
LEMD3-203ENST00000541171 BCAT2O15382 392 aaPredicted RBP25.03■■□□□ 1.6
LEMD3-203ENST00000541171 HLA-FP30511 346 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 FKBP3Q00688 224 aaKnown RBP25.03■■□□□ 1.6
LEMD3-203ENST00000541171 ZNF658Q5TYW1 1059 aaPredicted RBP25.03■■□□□ 1.6
LEMD3-203ENST00000541171 CHST9Q7L1S5 443 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 PNPLA1Q8N8W4 532 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 OR2T3Q8NH03 318 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 SNX19Q92543 992 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 ERCC4Q92889 916 aaPredicted RBP25.03■■□□□ 1.6
LEMD3-203ENST00000541171 ABCC13Q9NSE7 274 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 ABCB8Q9NUT2 735 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 PLA2G4CQ9UP65 541 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 NFE2L3Q9Y4A8 694 aa25.03■■□□□ 1.6
LEMD3-203ENST00000541171 TRIM49BA6NDI0 452 aa25.02■■□□□ 1.6
LEMD3-203ENST00000541171 PIK3R2O00459 728 aa25.02■■□□□ 1.6
LEMD3-203ENST00000541171 RGS7P49802 495 aa25.02■■□□□ 1.6
LEMD3-203ENST00000541171 RAB44Q7Z6P3 723 aaPredicted RBP25.02■■□□□ 1.6
LEMD3-203ENST00000541171 SETD7Q8WTS6 366 aaKnown RBP25.02■■□□□ 1.6
LEMD3-203ENST00000541171 LHX5Q9H2C1 402 aa25.02■■□□□ 1.6
LEMD3-203ENST00000541171 GAREM1Q9H706 876 aa25.02■■□□□ 1.6
LEMD3-203ENST00000541171 ARMCX3Q9UH62 379 aaPredicted RBP25.02■■□□□ 1.6
LEMD3-203ENST00000541171 ASPMQ8IZT6 3477 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 O00370 1275 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 IGLV3-19P01714 112 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 FTH1P19P0C7X4 201 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 SETSIPP0DME0 302 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 SGSHP51688 502 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 ADGRF1Q5T601 910 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 FMR1NBQ8N0W7 255 aaPredicted RBP25.01■■□□□ 1.59
LEMD3-203ENST00000541171 WFIKKN2Q8TEU8 576 aa25.01■■□□□ 1.59
LEMD3-203ENST00000541171 KCTD13Q8WZ19 329 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms